Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0372 ATGTGTTTTAAAGCGAATGCTTTATCCTATGATTACTCGGCCAGTATTGAGTGCTTACCAATCCCTCAAGATCCTCAGTATGGCGGGGGAATCATCACAAACCCTAGGCTTGATCAAGGATTGGAAGGGTGGTCCACATTCGGGGAAGGTAAAATCCAACACAGGGAATCCACAGCCAATAACTACATTGTGGCTCATTCCAGAAATCAACCCAATGATAGCGTTTCCCAGAAACTCTATTTACAAAAGGACAATCTCTACATAATCTCTGCTTGGGTACAAGtgaatgatgatggtggtgatggAGATGTTCTAGTAAGAGCAGTGTTCAAAATGGGAAATGGTTTGAAATATGGTGGTGCTGTTATAGCCAAGTCTAAATGTTGGTCAATGCTTAAGGGTGGTCTCACAGCTGAAGCTTCAGGTCCTGCTGAGCTCTTTTTTGAGAGCAATAACACATCTGTGGAAATATGGGTTGACAGCATCTCACTACAACCATTTACTAAAGAGCAATGGAAGTCTCACCAATATCAGAGCATGGAGCAGACACGAAAAAGAAAGGTGCAGTTCCAAGCAGTTGATAAACAAGGCAAACCAGTAGCAAACGCCAAGATATCCATCAACCAAAAGGCGTCACACTTCCCAATTGGTTgtaccataaacccaaacatACTCACCAACACTGCCTATCAAAATTGGTACCTTCCAAGGTTCAAATATGCTACCTTAGAAGACCAAATGAAGTGGTTTGTAAACGAGCCTGTACAAGGAAAAGAGGACTATTCTGCTGCCGATGCCTTGATTCACTTTGCAGAACAACATGGGATTTCAGTTCGTGGCCACAACGTTCACTGGGACTCTCCTTCTTTCCAGCCTACTTGGGTCCCTCCTCTCTCACCAGCACAACTTGGTGGTGCAGTGGTGAAAAGGCAGCATTCCATTATGAATAGGTACAGGCATAAGGTGATTGCTTGGGATGTTGTTAACGAGAACGTGCACTACAATTTCCTTGAGAGTAAACTCGGGAGCGATCAATCGGCAAGGATTTTTGAAGTGGCTCATGCTATTGACCCTACTGCAACATTGTTCATGAATGATTATAATACCATTGAGGATGCCAAAGACGGAAAAGCAACACCTGCAAGGTACCTTCAGAGGCTGAAAGAGTTGCAGAGCTACCCTGGTTACAGTGGATGGCCTATTGGAATAGGGCTTGAGGGCCATTTTTTTACTCCTGACATGGCTTACATGAGAGCTTCCCTTGATACGCTTGGTGCCTCAGGGATGCCAATTTGGCTTACAGAATTGGATGTTAATAGCCAACCCAACCAGGCTCTGTACTTGGAGGATATTCTGAGGGAGGCAACTTCTCATCCAAATGTTAAAGGAATTATAATATGGGCAGCATGGAAGCCTGAGGGATGCTATAGAATGTGCTTAACAGATAACAATTTCAAGAACTTGCCCACAGGAGATGTTGTAGATAAAGTGCTCAACGAGCTGGTCTAG 1509 0.4294 MCFKANALSYDYSASIECLPIPQDPQYGGGIITNPRLDQGLEGWSTFGEGKIQHRESTANNYIVAHSRNQPNDSVSQKLYLQKDNLYIISAWVQVNDDGGDGDVLVRAVFKMGNGLKYGGAVIAKSKCWSMLKGGLTAEASGPAELFFESNNTSVEIWVDSISLQPFTKEQWKSHQYQSMEQTRKRKVQFQAVDKQGKPVANAKISINQKASHFPIGCTINPNILTNTAYQNWYLPRFKYATLEDQMKWFVNEPVQGKEDYSAADALIHFAEQHGISVRGHNVHWDSPSFQPTWVPPLSPAQLGGAVVKRQHSIMNRYRHKVIAWDVVNENVHYNFLESKLGSDQSARIFEVAHAIDPTATLFMNDYNTIEDAKDGKATPARYLQRLKELQSYPGYSGWPIGIGLEGHFFTPDMAYMRASLDTLGASGMPIWLTELDVNSQPNQALYLEDILREATSHPNVKGIIIWAAWKPEGCYRMCLTDNNFKNLPTGDVVDKVLNELV 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0372 502 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 201 497 IPR001000 GO:0004553|GO:0005975
Sto10g0372 502 PANTHER GLYCOSYL HYDROLASE 2 499 IPR044846 GO:0004553|GO:0005975
Sto10g0372 502 PANTHER ENDO-1,4-BETA-XYLANASE A-LIKE 2 499 - -
Sto10g0372 502 SUPERFAMILY (Trans)glycosidases 198 500 IPR017853 -
Sto10g0372 502 Gene3D Glycosidases 200 501 - -
Sto10g0372 502 Pfam Glycosyl hydrolase family 10 211 468 IPR001000 GO:0004553|GO:0005975
Sto10g0372 502 SUPERFAMILY Galactose-binding domain-like 28 166 IPR008979 -
Sto10g0372 502 SMART glyco_10 247 498 IPR001000 GO:0004553|GO:0005975
Sto10g0372 502 Gene3D - 21 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0372 Sto-Chr10 2982367 2985563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0372 7 500 Glycoside Hydrolase AT4G33840 54.343 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0372 - - cic:CICLE_v10030382mg 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0372 10 2982367 2985563 Sto10g0372 10 2982367 2985563 ECH