Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0361 ATGAAGCTTCGAAGGTCGTCACTGAGGGTTTTTCTAGGGTTTTTGCTGCTGTCCTTCGTCCCGTCGTCAATGGCGAGATTCGTGGTGGAGAAGAACAGCTTGACGGTCACGTCGCCTGACAAAATCAAAGGCACGTACGATAGTGCGATCGGGAACTTCGGGATTCCTCAGTATGGAGGTAGCATGGCTGGGAATGTAGTGTACCCGAAGGATAACCAGAAGGGGTGTAAAGAGTTCGATGAGTTTGGGCTTTCCTTCAAATCCAAACCTGGAGCCCTCCCCACTATCCTTTTACTCGATCGTGGAGATTGCTTCTTTGCTTTGAAGGTATGGAATGCTCAGAAGGCTGGAGCTTCTGCTGTTCTCGTTGCAGATGATATCGAGGAAGCCTTAATAACAATGGACACACCTGAAGAGGATGGATCATCTGCAAAATACATAGAGAACATAACAATACCCTCTGCTCTCATTGAAAAACGTTTTGGCGAAACATTAAAGAAAGCtataagtggtggagacatggtCAACGTCAATCTTGATTGGAGAGAGGCTGTCCCGCACCCAGATGATCGTGTGGAATATGAACTATGGACCAATAGCAATGATGAATGCGGGGTTAAATGTGATATGTTGATGGATTTTCTAAAGGATTTTAAGGGTGCAGCACAGATACTAGAAAAGGGTGGCTACACTCAATTTACGCCCCATTATATAACTTGGTACTGTCCCCAGGCGTTTACATTAAGCAAGCAGTGCAAGTCCCAGTGCATAAATCATGGAAGATACTGTGCTCCTGATCCTGAGCAGGACTTCAGCTCGGGTTATGATGGGAAGGATGTGGTTATTGAAAATTTAAGGCAGCTATGTGTTTTCAAAGTTGCAAACGAAACCAAAAAGCCTTGGGTGTGGTGGGACTATGTGACTGATTTTCAAATTAGATGCCCCATGAAGGAGAAAAAATACAATAAGGAATGTGCAGATGCTGTTATTAAATCACTTGGGCTTGATAATAAGAAGATTGAAAAGTGCATGGGAAATCCAGATGATGATTCTGAAAACCCTGTTTTGAAAGAAGAGCAAGATGCTCAAGTTGGGAAGGGTACACGAGGCGATGTCACCATTTTGCCAACTCTTGTTGTTAATAATCGACAGTATCGAGGGAAATTGGAAAAAGGTGCTGTTCTGAAGGCTATTTGTTCTGGCTTTGAGGAAACTACTGAACCAGCTGTTTGTTTGAGCACAGATATGGAGACAAATGAATGCTTGGATAATAATGGTGGTTGTTGGCGAGATAAAGCAGCCAACATCACCGCTTGCAAGGATACATTCCGTGGGCGAGTATGTGAATGCCCCCTTGTTGATGGTGTGCAGTTCAAAGGAGATGGTTATACTACCTGTCAAGCCAGTGGACCTGGAGGTTGCAAGATAAACAATGGAGGTTGTTGGCATGAAGCCCGGAATGGACATGCATTTTCTGCTTGTTGGGATGATGGAGCGGTTAAATGCCAGTGTCCTCCAGGTTTTAGAGGTGATGGTGTCAAAACTTGTACAGATATTGATGAGTGCAAAGAGAAGAGAGCATGCCAGTGCCCTGAATGCAGCTGCAAGAATACCTGGGGAGGTTATGACTGCAGTTGTAGTGGAGATCTTCTGTATATCAAAGACCATGATACCTGCATAAGTAAAACAGCCAGCCAGGGAAGATCTGCATGGGCTGCTTTTTGGGTCATTTTAATTGGCTTAGCTGTTGCTGCTGGTGGGGCATATCTTGTGTACAAGTATAGAATAAGGCAATACATGGATTCTGAGATCAGAGCTATCATGGCACAGTACATGCCCTTGGACAGCCAAGCGGAAGTTCCAAATCATGTGAATGATGAAAGAGCATGA 1890 0.4402 MKLRRSSLRVFLGFLLLSFVPSSMARFVVEKNSLTVTSPDKIKGTYDSAIGNFGIPQYGGSMAGNVVYPKDNQKGCKEFDEFGLSFKSKPGALPTILLLDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDGSSAKYIENITIPSALIEKRFGETLKKAISGGDMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMDFLKDFKGAAQILEKGGYTQFTPHYITWYCPQAFTLSKQCKSQCINHGRYCAPDPEQDFSSGYDGKDVVIENLRQLCVFKVANETKKPWVWWDYVTDFQIRCPMKEKKYNKECADAVIKSLGLDNKKIEKCMGNPDDDSENPVLKEEQDAQVGKGTRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSTDMETNECLDNNGGCWRDKAANITACKDTFRGRVCECPLVDGVQFKGDGYTTCQASGPGGCKINNGGCWHEARNGHAFSACWDDGAVKCQCPPGFRGDGVKTCTDIDECKEKRACQCPECSCKNTWGGYDCSCSGDLLYIKDHDTCISKTASQGRSAWAAFWVILIGLAVAAGGAYLVYKYRIRQYMDSEIRAIMAQYMPLDSQAEVPNHVNDERA 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0361 629 ProSitePatterns Calcium-binding EGF-like domain signature. 518 544 IPR018097 GO:0005509
Sto10g0361 629 Pfam PA domain 63 165 IPR003137 -
Sto10g0361 629 Gene3D Laminin 411 467 - -
Sto10g0361 629 PANTHER VACUOLAR-SORTING RECEPTOR-LIKE PROTEIN 16 608 - -
Sto10g0361 629 Pfam Complement Clr-like EGF-like 501 521 IPR026823 -
Sto10g0361 629 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 16 608 - -
Sto10g0361 629 Gene3D - 24 188 - -
Sto10g0361 629 SUPERFAMILY PA domain 33 172 IPR046450 -
Sto10g0361 629 CDD PA_VSR 52 179 - -
Sto10g0361 629 ProSitePatterns EGF-like domain signature 2. 502 516 IPR000742 -
Sto10g0361 629 Gene3D Laminin 472 553 - -
Sto10g0361 629 CDD EGF_CA 518 546 - -
Sto10g0361 629 SMART egfca_6 518 560 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0361 Sto-Chr10 2880699 2886071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0361 25 629 Miscellaneous Gene Families AT2G14740 85.455 0.0 1112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0361 - - gmx:100803958 1193.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0361 10 2880699 2886071 Sto10g0361 10 2880699 2886071 ECH