Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0359 ATGGTGGTCTGCAAATGTCGCAAGGCTACTAAATTATATTGCTTCGTGCACAAAGTTCCTGTCTGCGGAGAATGTATCTGTTTCCCAGAGCACCAAATCTGCGTGGTTCGAACATATTCAGAATGGGTTATAGATGGGGACTACGATTGGCCTCCTAAATGCTGTCATTGTCAAGCTGTTCTTAGTGAGGGGGATGGATCTCTAACTACTCGGCTTGGTTGCTTACATGTTATCCACACAAATTGCTTAGTCTCACATGTCAAGAGTTTTCCTCCGCATACTGCCCCAGCAGGATATGTGTGTCCCGCATGTTCCACTTCGATATGGCCTCCCAAAAGTGTGAAAGATTCAGGATCTCGACTTCATTCCATGTTGAAGGAAGCTATCATGCAGACTGGTATGGAAAAGAATCTCTTTGGAAATCATCCAGTTTCATTGTCAGTCACAGAATCCCGCAGTCCTCCACCTGCATTTGCTTCGGATCCATTGATTAATAGGGAAAATATGACAAACTCAGACTCAGTAGAAGGGTACTCACCTGCAATTGGAGCAGGACCTTCTACGCTTTCTGTGACAGATATTGTGGAGATAGAGGGTCCTACTTCAGCTGGGAATTTCATGAAAGCCTCAAGTCCCACTGGACCTGGTGCTACTACAAGGAAGGGCTCGCTCCATATTGATAGGCAAAATTCTGAAGTTCCATATTATGCTGATGACGAAGATGGGAATCGTAAAAAGTACACAAGAAGAGGTCCATTCCGCCATAAGTTTCTTAGAGCATTGCTTCCTTTCTGGTCTAGTGCTTTACCCACCCTGCCAGTGACTGCACCCTCAAGAAAAGATGCACCAAATGCAAATGAAACCTCAGAAGGCCGTGCACGTCATCAAAGATCATCAAGGATGGACCCAAGAAAAATTCTTCTCATGATTGCAATTATGGCATGCTTGGCAACTATGGGTATATTGTATTACAGACTAGTGCAACGGGGCCCTGGTGAAGAGCTTCATAATGATGAGTAG 1020 0.448 MVVCKCRKATKLYCFVHKVPVCGECICFPEHQICVVRTYSEWVIDGDYDWPPKCCHCQAVLSEGDGSLTTRLGCLHVIHTNCLVSHVKSFPPHTAPAGYVCPACSTSIWPPKSVKDSGSRLHSMLKEAIMQTGMEKNLFGNHPVSLSVTESRSPPPAFASDPLINRENMTNSDSVEGYSPAIGAGPSTLSVTDIVEIEGPTSAGNFMKASSPTGPGATTRKGSLHIDRQNSEVPYYADDEDGNRKKYTRRGPFRHKFLRALLPFWSSALPTLPVTAPSRKDAPNANETSEGRARHQRSSRMDPRKILLMIAIMACLATMGILYYRLVQRGPGEELHNDE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0359 339 ProSiteProfiles Zinc finger RING-type profile. 54 105 IPR001841 -
Sto10g0359 339 SUPERFAMILY RING/U-box 36 119 - -
Sto10g0359 339 MobiDBLite consensus disorder prediction 285 300 - -
Sto10g0359 339 MobiDBLite consensus disorder prediction 204 218 - -
Sto10g0359 339 MobiDBLite consensus disorder prediction 202 222 - -
Sto10g0359 339 MobiDBLite consensus disorder prediction 146 165 - -
Sto10g0359 339 MobiDBLite consensus disorder prediction 275 300 - -
Sto10g0359 339 PANTHER ZINC FINGER PROTEIN-LIKE 1 1 338 IPR039043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0359 Sto-Chr10 2860703 2864771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0359 - - gmx:100805734 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0359 10 2860703 2864771 Sto10g0359 10 2860703 2864771 ECH