Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0357 ATGGCTTCTTCTTTGTTCTGCCCAATCTCTGCTTCCACCCGACCCCTTATTGACGACTCTGCAGCTTCCAAATCCTCCTTCCTCCATGGGACCAAGCTCTCGTCTTGTGCCCCGCGTTGTATTGCACGCGGCGGGAAGCGGAGCATGAGTCGATGGTGTTATAGGTCTCCTTCGGCGAGGTCCCTCGATCATATTCCCCAGCAGTTCAGGGAAGAAAATCTCAAGGATGGATTAAAGGAGAATTACAAGAATGCTCCTCAATATCTATACGGTCTTACTCCTGCACAAATGGACATGTTCATGACAGAAGATAACCCGGTCCGGAAGCAGGCTGAAAAAGTTACAGAGGAAAGCATCTCATCTGCCAGAAACTACTTAGATAATGGGGGTATGTGGAGTCTATCTGGCATGGGGGTCAAGGGCCCTAAAAAATACAGTATGAGTGTCAGTATGTATGGAGGAGGTTCCAGGGGATATGGAAGACCAAGATCTGCTCCACCAGATTTACCTTCTTTGCTCTTAGATGCTCGAATAGTCTATGTGGGTATGCCGATCGTGCCAGAAGTAACAGAACTCATTGTTTCCCAATTTATGTGGTTGGATTATGATAACCCTGCTAaacctatatatttatatcttaaTTCTTCTGGAACTCAGGATGAGAAGATGGAGACTGTTGGATCAGAAACTGATGCATATGCAATAGCAGATATGATATCGTATGTCAAATCAGATGTCTATACTGTGAATTGTGGAATGGCATACGGTCAAGCAGCAATGCTCCTGTCGCTTGGAACAAAGGGTTATCGTGCTCTACAGCCAAATTCATCTACAAAATTGTATCTCCCAAAAGTCAGCAGATCTAGTGGTGCTGTTATAGATATGTGGATTAAGGCGAAGGAACTAGAAGCAAACAGTGACTCGTACATTGAGCTGTTGGCAAAAGGAACAGGGAAATCTAAGGAAGAACTTGCTAAAGAAGTTCAGAGACCTAAATATTTCCGAGCTCAAGAAGCCATAGACTATGGACTTGCTGACAAAATCATTGACTCAAAGGATGCTGCATTTGAGAAACGGAATTATGATGAAATGCTTGCTCAATCAAGAGCTATGAGGAGACAAGCTGGTGGTCCTCAAGTCGCTCCTTCTGGCTTTAGGTAA 1161 0.4401 MASSLFCPISASTRPLIDDSAASKSSFLHGTKLSSCAPRCIARGGKRSMSRWCYRSPSARSLDHIPQQFREENLKDGLKENYKNAPQYLYGLTPAQMDMFMTEDNPVRKQAEKVTEESISSARNYLDNGGMWSLSGMGVKGPKKYSMSVSMYGGGSRGYGRPRSAPPDLPSLLLDARIVYVGMPIVPEVTELIVSQFMWLDYDNPAKPIYLYLNSSGTQDEKMETVGSETDAYAIADMISYVKSDVYTVNCGMAYGQAAMLLSLGTKGYRALQPNSSTKLYLPKVSRSSGAVIDMWIKAKELEANSDSYIELLAKGTGKSKEELAKEVQRPKYFRAQEAIDYGLADKIIDSKDAAFEKRNYDEMLAQSRAMRRQAGGPQVAPSGFR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0357 386 Pfam Clp protease 170 351 IPR023562 -
Sto10g0357 386 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 1, CHLOROPLASTIC 54 382 - -
Sto10g0357 386 PANTHER ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 54 382 IPR023562 -
Sto10g0357 386 Gene3D - 156 356 - -
Sto10g0357 386 CDD S14_ClpP_2 168 348 IPR001907 GO:0004176|GO:0004252|GO:0006508
Sto10g0357 386 PRINTS Clp protease catalytic subunit P signature 168 183 IPR001907 GO:0004176|GO:0004252|GO:0006508
Sto10g0357 386 PRINTS Clp protease catalytic subunit P signature 208 228 IPR001907 GO:0004176|GO:0004252|GO:0006508
Sto10g0357 386 PRINTS Clp protease catalytic subunit P signature 248 265 IPR001907 GO:0004176|GO:0004252|GO:0006508
Sto10g0357 386 PRINTS Clp protease catalytic subunit P signature 327 346 IPR001907 GO:0004176|GO:0004252|GO:0006508
Sto10g0357 386 SUPERFAMILY ClpP/crotonase 164 354 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0357 Sto-Chr10 2851401 2855007 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0357 K01358 - jre:109014211 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0357 10 2851401 2855007 Sto10g0357 10 2851401 2855007 ECH