Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0338 ATGGCCATCGACATCGCAACCTTGGAAGAAAGGTATATTGGTTGTTGCAGGAGACATGGTGTATTGCCTAACACTTCTATTCTGTCAAGTTTTCTAAAGGCTGAGGTCAAAAAGTCCTGCCAGGAGCTCTGTAGCATGGAGATTCTCATAGATGACCTCAAGGATATTGATTTTCTTCCACTTCTTGATGTATGCATGAATCTTGACACTTCTGAAATAGAAGCTGTTGATTTACATAGTGAATCATCATCTGAATTAAATGGAGAATATGCCTTATCGTTGATGCGTGCTATTAATCAAAAGCTTCGAGTAGTTGATGTACAGGATCAGTCATTTGGAAAAGACTTCTTACGGGATATCTGTCAAAGAGGTTTGGCATGCCAAGTTTTGACGTTGAGGTCTTTGCATTTCCGGAAGCTGAGTTTGGTGGGGGAGTTCATGAAGATGCATACCCTTAATCTTGATTTCAGCTCTTCATTGACCAGTTTCCAAGAGGACTGCTTTAGTTGCATGCCTAATCTAATGTGCCTTTCAATGTGTGAGACACGGATTTCCAATCTTTGGACAACTGTTGCTGCCCTCTCTAAGCTTCCATCTTTAGTTGAACTTAGGTTTCAATATTGGCTGTGTTGCAATGATGCTATGACCTCTTGTGTCTCATCCAGTGGGAAGTCAGACAGCACTGCTGAATTTGTTTTACCTAAAGGAGTTCCTTACATTGGTGAATCCTTCATTGACATGAATGAACTGACAGATTTTAACTTAAGTGCAGATGACCCACCAAGCAATTATTATTCCTCTGATGATGTTACAAATCATGATTCTCCAAGTATAGTTGAGGATTCATCAGATGATAGTGAGATTGAACTTTTAAGTCATCAGCAGAGATGCTGGTTGTCAGCTGTCTTTCCTAGGTGGAATGGACAGGTGCCTTATCAGAATGAGGATTTCTCAGTACAGAATCAAGATGGAGAGGATTTGTTGGGAGACACTTTTTCAAGGCATGGTGCTGATGTTTCTCTGAAGTATGTGCCCTGTCACGCATCACCAATATGCTATGAGAAAAATTACAGAGAATTTATGATAGCTTCATTACCAAACCTTAAAGTTTTGGATAATTTGCCCATCAGAAAATTTGAAAGGGACCGAGCTACTGAAACATTTTCTCAATACTTTGAGTATCTACCATACAGATGGAAGCATAAGGAGAGTGTTGTTAGTATTTTACAAAACCGTGAAATAAAATCAACCCATATTAATATGCGGACTCCAAAATGCAGACCATTATACCCTTCAGGAAAATCCCAATATTTTTATACTAGGTCTCTTTCTGCTGCTAAATTGGGGTCCTCCACTTGGCCTTTATTGTGTCCCCTTTCTCTATCTGGCTGTGGTTTGGGAGATGAAGATAGAGTCTTTCGTCCACGGCAGTTTGAGTACCATCCATCTGACTCCAGCTTGATGGTCTTCGGAACATTAGATGGTGAAGTAGTTGTTATCAACCATGAGAATGAGCATATTGTGAGTTACATcccttcacttggagcaatgaATAGTGTCTTGGGACTTAGTTGGCTCAAGAAATACCCTTCCAAGCTTATAGCAGGTTCAGACAATGGTTCCTTGAAATTATATGACATCCATCAAATGCGAAGAAGCCCAGGCATGCATAGCAGTTCTGGTTGTGTTACTTTTGATGAGTTTGACCAGTTGACGTCTGTTCATGTCAACTCCACAGATGAACTATTTCTTGCTAGTGGTTACTCAAGAAATGTTGCTTTATATGACATTAGCAGTGGAAAGCGCTTGCAAGTGTTCACTGATATGCATCAGGGGCATATTAATGTAGTTAAATTTGCTAATCATTCTCCTTCAATTTTTGCCACTTCATCCTTTGATCAGGATGTCAAGATGTGGGATTTGAGACAGAAACCCGTACACCCTTGCTTCACTGCTTCAAGTTCTAGAGGAAATGTTATGGTCTGCTTTTCTCCAGATGATCAATATATTCTTGCATCAGCTGTTGACAATGAGGTTAGACAACTTCTGGCTGTTGATGGTAGGCTTCACTTGGTTTTTGATATTCCTTCCACCGGAAGCTCTCAGAACTACACCCGTTCTTATTACATGAATGGGAGGGACTACATTATCAGTGGGAGCTGTGATGAACAAGTCATTCGTGTTTGCTGTACTCAAACAGGGAGGCGATTGAGAGATGTTTCCCTGGAGGGAAGAAGCTTAGGAAGTTCCATGTTTGTTCAATCTTTGAGGGGTGATCCTTTCAGGGATTTCAATATGAGTGTTTTAGCTGCCTATATGCGACCAGCTTCCAAGTCTGAAATTGTTAAGGTCAATTTATTAGCATCAAGTGGCTATGCCAAGGATGATTTTGATCAGCAGGGCCCTTGCCCTTCCCATAGTATGGGAGCTTGA 2433 0.404 MAIDIATLEERYIGCCRRHGVLPNTSILSSFLKAEVKKSCQELCSMEILIDDLKDIDFLPLLDVCMNLDTSEIEAVDLHSESSSELNGEYALSLMRAINQKLRVVDVQDQSFGKDFLRDICQRGLACQVLTLRSLHFRKLSLVGEFMKMHTLNLDFSSSLTSFQEDCFSCMPNLMCLSMCETRISNLWTTVAALSKLPSLVELRFQYWLCCNDAMTSCVSSSGKSDSTAEFVLPKGVPYIGESFIDMNELTDFNLSADDPPSNYYSSDDVTNHDSPSIVEDSSDDSEIELLSHQQRCWLSAVFPRWNGQVPYQNEDFSVQNQDGEDLLGDTFSRHGADVSLKYVPCHASPICYEKNYREFMIASLPNLKVLDNLPIRKFERDRATETFSQYFEYLPYRWKHKESVVSILQNREIKSTHINMRTPKCRPLYPSGKSQYFYTRSLSAAKLGSSTWPLLCPLSLSGCGLGDEDRVFRPRQFEYHPSDSSLMVFGTLDGEVVVINHENEHIVSYIPSLGAMNSVLGLSWLKKYPSKLIAGSDNGSLKLYDIHQMRRSPGMHSSSGCVTFDEFDQLTSVHVNSTDELFLASGYSRNVALYDISSGKRLQVFTDMHQGHINVVKFANHSPSIFATSSFDQDVKMWDLRQKPVHPCFTASSSRGNVMVCFSPDDQYILASAVDNEVRQLLAVDGRLHLVFDIPSTGSSQNYTRSYYMNGRDYIISGSCDEQVIRVCCTQTGRRLRDVSLEGRSLGSSMFVQSLRGDPFRDFNMSVLAAYMRPASKSEIVKVNLLASSGYAKDDFDQQGPCPSHSMGA 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0338 810 Gene3D Ribonuclease Inhibitor 99 222 IPR032675 -
Sto10g0338 810 Gene3D - 471 756 IPR015943 GO:0005515
Sto10g0338 810 ProSiteProfiles Trp-Asp (WD) repeats profile. 607 642 IPR001680 GO:0005515
Sto10g0338 810 PANTHER BNAC09G30780D PROTEIN 1 796 IPR046377 GO:0071493|GO:0080008
Sto10g0338 810 SMART WD40_4 558 596 IPR001680 GO:0005515
Sto10g0338 810 SMART WD40_4 504 546 IPR001680 GO:0005515
Sto10g0338 810 SMART WD40_4 645 683 IPR001680 GO:0005515
Sto10g0338 810 SMART WD40_4 599 640 IPR001680 GO:0005515
Sto10g0338 810 SMART LRRcap_2 354 372 IPR003603 -
Sto10g0338 810 Gene3D Ribonuclease Inhibitor 332 393 IPR032675 -
Sto10g0338 810 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 607 642 - -
Sto10g0338 810 MobiDBLite consensus disorder prediction 264 285 - -
Sto10g0338 810 SUPERFAMILY L domain-like 125 208 - -
Sto10g0338 810 SUPERFAMILY WD40 repeat-like 474 740 IPR036322 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0338 571 689 Miscellaneous Gene Families AT5G08390 27.273 3.70e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0338 - - gmx:100806443 1215.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0338 10 2704451 2711527 Sto10g0338 10 2704451 2711527 ECH