Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0323 atgagaatggaatgggAAGAAGAAGTCcactcagcacgccacgtcaacaatctggtacacTGCAGttatatggtagagaagaatcGGAAACTGCATAACCAGTTTGACAATGAAGCCTCAACATCTTCTATTGGTGCCTCTAGCTCCGGAAATCCTATATTTAGCGGAGTTTCGATCTTTGTTGATGGTTTCACGGTTCCTTCAAGCCAGGAATTGCGAGGCTACATGTTAACATATGGTGgaaattttgagaattatttCTCAAGGCATCGTGTTACACATATCATCTGCAGCAATCTTCCCAACAGTAAAGTTAAGAACTTGAGAGCCTTCAGTGCAGGGCTTCCAGTTGTAAAACCCACTTGGATATTAGATTCAGTTGCAGCTAGAAAACTACTGAGCTGGGTGCCTTACCAACTTGATCAGCTTGCTAATAATCAACCAAAACTGTCAGCCTTCTTTACACCCAAAAATAGCAAATTGTTGGAGGATTCTTCTAATAATGGCCTTTGTCGAATAGTAGCTGATATCGAAGATTCATCTTTGAGATTTGACCAGTCAAAGGATACACACTCATCCAAAGCTGATGAGATGGTTGAATTTAAAAATCAATCCAGTTTTGAATCCGATGATATCCTTGAGAATACTGATGCAACTGCTATTGAAGAGCCAAGTAGTGTTAGAGGAAATTGCATTGAAGTAGAACTTgcagagggagaagagagaaatGTGCAACGTGAACTTGAACCCAGTCATCAAGGATCAGCTACATCTGCTAGTAGTCGCTGCTTAGATGACCAGAATTCTAAAGAACGTCCAAGTTCTGTAGCCATGGGGCCTTCTAAACAGTGTCATTCCACTCTTGCAGACCCTAATTTTGTGGAAAATTATTTCAAGAGCTCACGGCTGCACTTTATAGGAACTTGGAGAAATCGATATCGAAAGCGTTTTCCTATCATGTCTACTGGGGTTAATTCTGATAGTTCTGATGTTAATGCCTCTGATATTTCTGGGAGAAAAGTTGTTATACATGTTGATATGGACTGCTTTTTTGTTTCAGTTGTTATTAGGAACCATCCTGAACTTTTGGACAAGCCTGTAGCTGTAAGTCACTCAAACAATTCGAAAGGAACTGCTGAGATTTCATCTGCAAACTACCCTGCTCGTAGTTATGGTATTAAGGCTGGTATGTTTGTCCGAAACGCTAAGGCTCTTTGTCCTAATCTTGTCATTTTTCCATACAACTTTGAAGCTTATGAGGAGGTAGCTGATCAATTTTATAGTATATTGCACCGGCGTTGCAACAAAGTGCAGGCTGTTAGCTGTGATGAAGCATATTTGGAGGTCACAGTTTCAGAGGGTGAAGATCCAGAACTTTTGGCTTCATTAATTAGAGAAGAAATCTTTGAGACAACGAGATGTACTGCAAGTGCTGGTATAGCTGAAAACATGCTTATGGCTCGCATTGCTACAAGAACTGCAAAACCAAATGGTCAATATCACATTACTCCAGAGATGGTTGATGATCATCTGTGTCAACTTCCAATTAGTGCACTTCCGGGAATAGGATATGTTTTGGAGGAGAAGCTGAAGAAGCAGAATATTCATACTTGTGGAGAATTGCGTATTATTTCCAAGGATTCCCTGCAGAAGGACTTTGGAATGAAAACTGGGGAAATGTTGTGGAGTTACAGCAGGGGAATTGATAATCGACTGGTTGGGGTCATTCAGGAAAGCAAGTCTATTGGTGCTGAAGTAAATTGGGGTGTGAGATTCAACGATATGGAAGATTGTGAACACTTCCTTATAGACCTTTGCAAGGAAGTTTCATTGCGACTGCAAGGTTGTGGAGTACAGGGGCGCACTTTCACCCTTAAGatcaaaaagagaagaaaagatgcTGAAGAACCTGCAAAGTATATGGGCTGTGGAGACTGTGAAAATATGAGTCACTCTATGAAGATTCCACTTGCTACTGATTGTGTGGATGAAATCCAAAGAATAGTAAAGCGGCTTTTTGGACTTTTTCACATAGATGTCAAGGACATTCGAGGTATTGGTTTGCAAGTTTCCAAACTTGAAGGCACAGATGCTTCTAAGCAAGGTATGGAAAAGAACTTTTTAAAATCATGGCTCACTTCAGGCTCTACAAGTATGAGAAAAAAGAATTGTGCTAGAGTTCATGGTGAACAGAATTTGGATGACACTTTGGGTCAAGCATCAAGAGATTCAGGTGGACCTTCAGTTCAGATGGACAGTAAAATGCTAAATGATCGAGCTAGCTCTGATCTGATTTCAACTCCACCTCCTCTATGCCATCTGGATCTTCTGAAGCAGTATATCAAAGTGAAGATTGAACGAGATATTGAAGAGATCTATATTTGTTTCCGGCTTCTTAAAAGGTAG 2406 0.384 MRMEWEEEVHSARHVNNLVHCSYMVEKNRKLHNQFDNEASTSSIGASSSGNPIFSGVSIFVDGFTVPSSQELRGYMLTYGGNFENYFSRHRVTHIICSNLPNSKVKNLRAFSAGLPVVKPTWILDSVAARKLLSWVPYQLDQLANNQPKLSAFFTPKNSKLLEDSSNNGLCRIVADIEDSSLRFDQSKDTHSSKADEMVEFKNQSSFESDDILENTDATAIEEPSSVRGNCIEVELAEGEERNVQRELEPSHQGSATSASSRCLDDQNSKERPSSVAMGPSKQCHSTLADPNFVENYFKSSRLHFIGTWRNRYRKRFPIMSTGVNSDSSDVNASDISGRKVVIHVDMDCFFVSVVIRNHPELLDKPVAVSHSNNSKGTAEISSANYPARSYGIKAGMFVRNAKALCPNLVIFPYNFEAYEEVADQFYSILHRRCNKVQAVSCDEAYLEVTVSEGEDPELLASLIREEIFETTRCTASAGIAENMLMARIATRTAKPNGQYHITPEMVDDHLCQLPISALPGIGYVLEEKLKKQNIHTCGELRIISKDSLQKDFGMKTGEMLWSYSRGIDNRLVGVIQESKSIGAEVNWGVRFNDMEDCEHFLIDLCKEVSLRLQGCGVQGRTFTLKIKKRRKDAEEPAKYMGCGDCENMSHSMKIPLATDCVDEIQRIVKRLFGLFHIDVKDIRGIGLQVSKLEGTDASKQGMEKNFLKSWLTSGSTSMRKKNCARVHGEQNLDDTLGQASRDSGGPSVQMDSKMLNDRASSDLISTPPPLCHLDLLKQYIKVKIERDIEEIYICFRLLKR 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0323 801 Gene3D - 514 568 - -
Sto10g0323 801 Gene3D - 578 701 IPR036775 GO:0003684|GO:0006281
Sto10g0323 801 ProSiteProfiles BRCT domain profile. 49 140 IPR001357 -
Sto10g0323 801 SUPERFAMILY BRCT domain 15 142 IPR036420 -
Sto10g0323 801 ProSiteProfiles UmuC domain profile. 342 523 IPR001126 GO:0006281
Sto10g0323 801 CDD PolY_Rev1 293 693 - -
Sto10g0323 801 Gene3D - 359 413 - -
Sto10g0323 801 SUPERFAMILY DNA/RNA polymerases 338 573 IPR043502 -
Sto10g0323 801 SMART BRCT_7 51 130 IPR001357 -
Sto10g0323 801 Hamap DNA polymerase IV [dinB]. 339 705 IPR022880 GO:0003887
Sto10g0323 801 Gene3D BRCT domain 43 140 IPR036420 -
Sto10g0323 801 PIRSF REV1 2 758 IPR012112 GO:0003684|GO:0006281|GO:0016779|GO:0042276
Sto10g0323 801 SUPERFAMILY Lesion bypass DNA polymerase (Y-family), little finger domain 578 691 IPR036775 GO:0003684|GO:0006281
Sto10g0323 801 MobiDBLite consensus disorder prediction 239 285 - -
Sto10g0323 801 Pfam BRCT domain, a BRCA1 C-terminus domain 52 138 IPR001357 -
Sto10g0323 801 Pfam impB/mucB/samB family C-terminal domain 579 699 IPR017961 GO:0003684|GO:0006281
Sto10g0323 801 CDD BRCT_Rev1 53 140 - -
Sto10g0323 801 Gene3D - 291 322 - -
Sto10g0323 801 Gene3D - 342 504 IPR043128 -
Sto10g0323 801 PANTHER DNA REPAIR PROTEIN REV1 21 775 - -
Sto10g0323 801 Pfam impB/mucB/samB family 345 491 IPR001126 GO:0006281
Sto10g0323 801 MobiDBLite consensus disorder prediction 249 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0323 Sto-Chr10 2587789 2600077 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0323 K03515 - gmx:100778409 1111.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0323 10 2587789 2600077 Sto10g0323 10 2587789 2600077 ECH