Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0305 ATGTCGGTTTCTGGAATCCAAGGCCAAATTCTTGAGGTTACTGTTGTGGGGTGCTCTAGGTTGAAGGACACAGAGTGGATTTCAAGGCAGGATCCCTATGTCTGCCTCGAATATGCTAGTACCAAGTTCCGAACCAAAACTTGCACAGACGGTGGAAAAAATCCTACATTCCAAGAGAAGTTCGTGTTTTCGTTGATTGAAGGGCTTAGGGAAATTATTGTGGGAGTTTGGAACAGCAATACTCTCACCTTCGATGATCATATCGGCAGTGGAAAGGTTCAATTGCATAAGGTTCTTTCAGAAGGTTTTGATGACTCTGCTTGGCCTCTTCAAACCAAAACTGGCAGGAATGCAGGTGAAGTAAAACTCATATTGCATTACGCAAATGCTAAAAAACCAGCTTCAAGCTATGCTCCATCAGCACCACCGTATACGTCACAACCAAATTCCCATGTACACCAATATTCTGCACCACCTGCTTCTTATCCACCACCGGCATCTGCTTATTCTTACCCACCACCGGCATCTGCAGTTTCTTATCCTCCACCACCTGCCACGACATACCATACTTCATCTCCCTATCCCTCATATTCATCAGCCTATCCTCCATCATCATATCCTCCTCCTCCTGCTGCCTATCCTCCCCATCCATATCCACCACCTTCAGCTTATCCTCCACCTCCATATCCACCATCTCAACCATCTTCATATTATGCTCCTAGTAATCATGGTCCTTATCCTGGAGCATACCCGCCACCACCATattaa 768 0.457 MSVSGIQGQILEVTVVGCSRLKDTEWISRQDPYVCLEYASTKFRTKTCTDGGKNPTFQEKFVFSLIEGLREIIVGVWNSNTLTFDDHIGSGKVQLHKVLSEGFDDSAWPLQTKTGRNAGEVKLILHYANAKKPASSYAPSAPPYTSQPNSHVHQYSAPPASYPPPASAYSYPPPASAVSYPPPPATTYHTSSPYPSYSSAYPPSSYPPPPAAYPPHPYPPPSAYPPPPYPPSQPSSYYAPSNHGPYPGAYPPPPY 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0305 255 CDD C2 11 108 - -
Sto10g0305 255 Gene3D C2 domain 9 129 IPR035892 -
Sto10g0305 255 MobiDBLite consensus disorder prediction 224 243 - -
Sto10g0305 255 SMART C2_3c 10 107 IPR000008 -
Sto10g0305 255 MobiDBLite consensus disorder prediction 139 156 - -
Sto10g0305 255 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 129 IPR035892 -
Sto10g0305 255 Pfam C2 domain 10 100 IPR000008 -
Sto10g0305 255 ProSiteProfiles C2 domain profile. 1 109 IPR000008 -
Sto10g0305 255 MobiDBLite consensus disorder prediction 134 159 - -
Sto10g0305 255 PRINTS Proline rich extensin signature 139 151 - -
Sto10g0305 255 PRINTS Proline rich extensin signature 154 175 - -
Sto10g0305 255 PRINTS Proline rich extensin signature 180 196 - -
Sto10g0305 255 PRINTS Proline rich extensin signature 210 235 - -
Sto10g0305 255 PANTHER CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790) 4 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0305 Sto-Chr10 2413062 2415188 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0305 - - vvi:100241815 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0305 10 2413062 2415188 Sto10g0305 10 2413062 2415188 ECH