Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0297 ATGGCTACCACCTCCAGAGTTAGCTTGCTGTTGCTGCTGTGCGTGTTGCCGGCCATGGTTGCAGCCATCCGGCTGGAGAGGAAGCTATTCTCGGTGCAGGGTCGTGTGTACTGCGACACTTGCCTTGCCGGTTTTGACACTTCTGCGGCCACTTACATTGTCGCCCTTCTCCACTACGCCGCCGCCAATGTCACCACCACCCACAAAGCCCATCCAATGATGTCGGCCGCCGAGATCTCCGCCGTGGCCACCACTCtcctccaaaccccaaatcccaatttCCTCATCTTCGGCCTCACCCACGAATCCCTCCTCTGGTTCGCCCTAAACCACCACGGCCGCCGCACCGTATTGCTGGACGAGAACGAGTATTTGGTGTCCAAATTCGAGCAATCGAACCCGGGATTCGAAGCCTACGACGTCCAATTCACCACCAAGGTGAGCGAATCCTCGCATTTGCTCTCGCAGGCGAAGACCCGGTTCAGGAGCGAGTGCCGGCCGGTTCAGAATCTCTTGTTCTCGGACTGCAAGCTCGGAATCAACGACTTGCCGAACCACATTTACGAGATCCCTTGGGATGTGATCCTCGTGGACGGGCCGCGCGGGTATTTCCCGGCGGCGCCGGGGAGGATGTCGGCGATCTTCACGGCGTCGGTGCTTGCGCGGAGCAAGAAAAGCGCCGCCGGAGAAGCGAAGAGGAAAACCCATGTTTTCGTGCACGATTTGAAGAGGGAGGTGGAGAGGGTTTTCAGCGATGAATTTCTGTGTAAAGAGAATTTGAGCTTCAGGGAAATTGAGATGGTTTTGAGCTTCCCAGTGAACAAGCAACCTAGTTTCCTTGTCTTCATAGAGGGAAGAGGATCAGGATAG 870 0.5494 MATTSRVSLLLLLCVLPAMVAAIRLERKLFSVQGRVYCDTCLAGFDTSAATYIVALLHYAAANVTTTHKAHPMMSAAEISAVATTLLQTPNPNFLIFGLTHESLLWFALNHHGRRTVLLDENEYLVSKFEQSNPGFEAYDVQFTTKVSESSHLLSQAKTRFRSECRPVQNLLFSDCKLGINDLPNHIYEIPWDVILVDGPRGYFPAAPGRMSAIFTASVLARSKKSAAGEAKRKTHVFVHDLKREVERVFSDEFLCKENLSFREIEMVLSFPVNKQPSFLVFIEGRGSG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0297 289 TIGRFAM A_thal_3515: uncharacterized plant-specific domain TIGR01627 53 263 IPR006514 GO:0045492
Sto10g0297 289 PANTHER OS11G0490100 PROTEIN 50 273 IPR006514 GO:0045492
Sto10g0297 289 Pfam Polysaccharide biosynthesis 78 261 IPR021148 -
Sto10g0297 289 PANTHER CDC2 PROTEIN KINASES-LIKE 50 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0297 Sto-Chr10 2359989 2371294 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0297 - - vun:114176135 294.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0297 10 2359989 2371294 Sto10g0297 10 2359989 2371294 ECH
Sto2g0568 2 4819648 4820616 Sto10g0297 10 2359989 2371294 ECH