Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0282 ATGGGTTCGAATTCGATTACTTTGACACACACTCTTCCTCACCTTCGCTTCTCTGTCTCTCACTCGCTTTTCCTTCATCACCACCATCAATGTCATTCTGGGTATTCCCATCTCGCTAATTCCACCCCTAAACGACAGCGTTTCGCCTTTCCCGGTCGTTCCGGTGGATCTTCTTCACCTACGGCCCTCGCGTCTTCTGGCCCACGCGTCAATTCCGTCCCACCCAGGAATGGAACATACAGGGTTGctgattttatgacaaagaAGGAAAATTTGTATGTTGTGAAAACCACCACTACTGTTGATGAAGCTCTGGAGGCTCTGGTCAACAACAGAATCAGTGGTCTTCCCGTAATTGACGATGATTGGAATTTGGTTGGTGTTGTTTCTGATTATGACTTGTTAGCAATTGATTCAATATCAGGTGGCAGTCAATGTGACACGAACTTGTTTCCTGATGTTGACAGTTCTTGGAAAACATTCAATGATATTCAAAAGCTGCTTTCTAAGACTAATGGCAAAGTTGTTGGTGATTTGATGACGCCCACTCCACTTGTTGTTCATGAATCAACTAATCTAGAAGAAGCTGCCAGGCTCTTGCTCGAAACAAAATACCGCCGACTACCTGTAGTAGATGATAATGGCAAGCTGGTTGGACTTATTACAAGGGGAAACATTGTTAAAGCAGCTTTACAGTCGAAACGCGCCGGTGAATGGTGA 720 0.4403 MGSNSITLTHTLPHLRFSVSHSLFLHHHHQCHSGYSHLANSTPKRQRFAFPGRSGGSSSPTALASSGPRVNSVPPRNGTYRVADFMTKKENLYVVKTTTTVDEALEALVNNRISGLPVIDDDWNLVGVVSDYDLLAIDSISGGSQCDTNLFPDVDSSWKTFNDIQKLLSKTNGKVVGDLMTPTPLVVHESTNLEEAARLLLETKYRRLPVVDDNGKLVGLITRGNIVKAALQSKRAGEW 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0282 239 MobiDBLite consensus disorder prediction 52 73 - -
Sto10g0282 239 Gene3D - 77 237 IPR046342 -
Sto10g0282 239 ProSiteProfiles CBS domain profile. 180 237 IPR000644 -
Sto10g0282 239 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX1, CHLOROPLASTIC-LIKE 58 236 - -
Sto10g0282 239 PANTHER CBS DOMAIN-CONTAINING PROTEIN CBSX2, CHLOROPLASTIC 58 236 - -
Sto10g0282 239 CDD CBS_pair_plant_CBSX 88 229 - -
Sto10g0282 239 MobiDBLite consensus disorder prediction 46 75 - -
Sto10g0282 239 Pfam CBS domain 176 229 IPR000644 -
Sto10g0282 239 Pfam CBS domain 82 136 IPR000644 -
Sto10g0282 239 ProSiteProfiles CBS domain profile. 86 148 IPR000644 -
Sto10g0282 239 SUPERFAMILY CBS-domain pair 75 229 IPR046342 -
Sto10g0282 239 SMART cbs_1 91 139 IPR000644 -
Sto10g0282 239 SMART cbs_1 183 231 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0282 Sto-Chr10 2258662 2262659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0282 - - gmx:100814621 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0282 10 2258662 2262659 Sto10g0282 10 2258662 2262659 ECH