Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0261 ATGGCCTCGTCTACTTCCTATTCTACACCCTCCTCTCCTTTTTCTCTGAGGGGTTCTCGTACTCGTACCCTTCACAAATCCATTCTCCCCTTTTACACCTCTCCTCGCCACCTTAACCCTACTCCCCCTTCTTTCCGCACCACCCAGAAGGGGCTTACGGCTCAACCCCCATATCTTCTTCCCAAGATTCAATGCGTGCGACAAACGAGAGCTACAGCAGTCACCAAAGACTCATGGGAAAACTCGGTTTTGAATAGTGAAACCCCTGTCCTTGTTGAATTTTATGCAAATTGGTGTGGCCCATGCAGGATGGTACACCCATTAATTGACGAGATTGCAAAGGAGTATGCTGGCAAACTGAAATGCTTTGTGCTCAACACAGACACTGATTTGGAGATTGCTGAAGACTATGAAATTAAGGCTGTGCCGGTGGTTTTGTTGTTCAAAAATGGCCAGAAATGCGACGCCGTAGTTGGTACCATGCCGAAGGAGTTTTATGTGACTGCCATCGAGAGGGTGCTGAAGTCCTAA 531 0.4783 MASSTSYSTPSSPFSLRGSRTRTLHKSILPFYTSPRHLNPTPPSFRTTQKGLTAQPPYLLPKIQCVRQTRATAVTKDSWENSVLNSETPVLVEFYANWCGPCRMVHPLIDEIAKEYAGKLKCFVLNTDTDLEIAEDYEIKAVPVVLLFKNGQKCDAVVGTMPKEFYVTAIERVLKS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0261 176 Gene3D Glutaredoxin 71 176 - -
Sto10g0261 176 PRINTS Thioredoxin family signature 90 98 - -
Sto10g0261 176 PRINTS Thioredoxin family signature 98 107 - -
Sto10g0261 176 PRINTS Thioredoxin family signature 138 149 - -
Sto10g0261 176 Pfam Thioredoxin 73 168 IPR013766 -
Sto10g0261 176 PANTHER GEO12009P1 52 175 - -
Sto10g0261 176 TIGRFAM thioredoxin: thioredoxin 75 172 IPR005746 GO:0015035
Sto10g0261 176 PANTHER THIOREDOXIN M3, CHLOROPLASTIC 52 175 - -
Sto10g0261 176 ProSitePatterns Thioredoxin family active site. 91 109 IPR017937 -
Sto10g0261 176 CDD TRX_family 81 171 - -
Sto10g0261 176 ProSiteProfiles Thioredoxin domain profile. 35 176 IPR013766 -
Sto10g0261 176 SUPERFAMILY Thioredoxin-like 67 174 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0261 Sto-Chr10 2111540 2114071 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0261 K03671 - gmx:100306680 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0261 10 2111540 2114071 Sto10g0261 10 2111540 2114071 ECH