Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0246 ATGGGAACTTCTCAGAGCCGCGAGGGCCTACACTTCTCCGATTCTGACGATtacgaagaagaagatgatgataatgagCAACACCAAACTCCTCAAACTTCTTCCGGAGCCAAATCCACAACGCCAGTGAATCAACTCGATGAAGTCGATGAGAAGCTCAAAGCGCTGAAGCTCAAATACCAGTCGCCTTCCTCGCAAACCCCTAATTTGAAAAACTCTGTCAAGCTTTACCTTCACATCGGTGGCAACGCTCCCAATGCTAAGTGGATCATTTCCGATAAGCGCACATCTTACGCTTTTGTTAGAACATCTAGTGACAACGctgaggatgaagaagaagaggaggaggaggaggggtcGTACGGTAAGGGAGAATCATGGTGGGTGCTGAAGGTGGGTTCCAAGGTTCGAGTTAGGGTTTCCACGGAAATGCAACTGAAGATGTTCGGTGATCAGCGTCGGGTTGATTTTGTGTCGAACGGCGTATGGGCGTTGAAGTTCCCCACCGACGAAGCCTATAGGAAATTTGTGACTGAATTTCAGGATTGTTTATTTGAGAATGTGTACGGGATTGAAGCCTCGGAAGAGAACAAGGTCAAGATTTATGGGAAGGAATTCATAGGGTGGGTGAAACCTGAGGCGGCTGATGATTCGGTGTGGGAGGATGCAGATGATGGGTTCGGGAAGAGTCCTGAGCCTGGAACACCAGTTAGGGTAACCGATGATTTGATGGAGGAGTTTGAGGAGGCTGCTAATGGAGGAGTACAGAGCTTGACATTAGGTGCTCTTGATAATAGTTTCTTGGTGAATGATACGGGTGTTCAGGTTTACAGAAATTTCAACCATGGGATTCATGGGAAGGGTGTCACTGTAAAATTCGATGGTGGTAATTTACGGGGAAGTTCGAGTTCAGCGCAATCAGCAGCGAAGAAAGCGTTGTTAATGAGAGCAGAAACTAATATGCTGCTTATGAGTCCACTGAAGGATGGGAAACCTCATGCCTCAGGTCTTCACCAACTTGATATCGAGACTGGTAAGATTGTCACGGAATGGAAGTTTGAGAAGGATGGAGCCGAGATTACCATGAGGGATATCACAAATGATACCAAGGGGTCACAATTGGATCCTTCTGAGTCCACGTTTTTGGGATTAGATGATAATAGGCTTTGTCAATGGGATATGCGTGACAGGAAAGGAATGGTTCAAAGTATTGCGGGAGCTAATTCACCTGTGTTGAATTGGAACCAGGGGCATCAATTCTCTAGAGGAACAAACTTTCAATGCTTTGCCACTACCGGAGATGGTTCAATAGTTGTAGGATCCCTTGATGGAAAAATACGGTTGTATTCAAAGACATCAATGCGACAAGCCAAGACTGCTTTTCCGGGTCTAGGTTCTCCAATTACCCACGTTGATGTTACTTATGATGGCAAGTGGGTGTTAGGCACTACTGATACTTATTTGGTACTGATTTGCACCTTATTCACTGATAAAGATGGGAAAACCAAGACTGGATTTTCTGGACGAATGGGGAACAAAATACCAGCTCCAAGACTTTTGAAGCTGACTCCTCTGGATTCACATTTAGCTGGCACAAGCAATAAGTTTCATGGAGGCCACTTTTCATGGGTTACTGAGAATGGTAAACAGGAGCGCCACCTTGTTGCCACTGTGGGCAAGTTCAGTGTGATATGGGACTTTCAGCAGGTGAAGAACAGTGCTCATGAATGTTACAGGAATCAGCAAGGGCTCAAGAGCTGTTACTGCTATAAGATAGTACTGAAGGACGAATCGATTGTGGAATCGCGATTTATGCACGACAAGTTTGCTGTTAGTGACTCCCCAGAAGCTCCGTTGGTGGTGGCAACTCCTATGAAAATGCCAGCTGCTGCCATAGAGCCTGGGTTCCCCAAACATGAGCCATTTAGTTTCAACCATCCATCAGTTGGAGCCACCCATTTAACCCAAGACTTTTGTCTTTCAGCTTTTGGAAAAAAGTCTTTAGCCAGATGGGAAAATTCAGCAGATTTCACAAATGTTTTTCTTCCACTAGAAGCGGGAGCTAAATGA 2070 0.4411 MGTSQSREGLHFSDSDDYEEEDDDNEQHQTPQTSSGAKSTTPVNQLDEVDEKLKALKLKYQSPSSQTPNLKNSVKLYLHIGGNAPNAKWIISDKRTSYAFVRTSSDNAEDEEEEEEEEGSYGKGESWWVLKVGSKVRVRVSTEMQLKMFGDQRRVDFVSNGVWALKFPTDEAYRKFVTEFQDCLFENVYGIEASEENKVKIYGKEFIGWVKPEAADDSVWEDADDGFGKSPEPGTPVRVTDDLMEEFEEAANGGVQSLTLGALDNSFLVNDTGVQVYRNFNHGIHGKGVTVKFDGGNLRGSSSSAQSAAKKALLMRAETNMLLMSPLKDGKPHASGLHQLDIETGKIVTEWKFEKDGAEITMRDITNDTKGSQLDPSESTFLGLDDNRLCQWDMRDRKGMVQSIAGANSPVLNWNQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSKTSMRQAKTAFPGLGSPITHVDVTYDGKWVLGTTDTYLVLICTLFTDKDGKTKTGFSGRMGNKIPAPRLLKLTPLDSHLAGTSNKFHGGHFSWVTENGKQERHLVATVGKFSVIWDFQQVKNSAHECYRNQQGLKSCYCYKIVLKDESIVESRFMHDKFAVSDSPEAPLVVATPMKMPAAAIEPGFPKHEPFSFNHPSVGATHLTQDFCLSAFGKKSLARWENSADFTNVFLPLEAGAK 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0246 689 Pfam VID27 C-terminal WD40-like domain 264 579 IPR013863 -
Sto10g0246 689 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 629 IPR040458 -
Sto10g0246 689 SUPERFAMILY Putative isomerase YbhE 335 535 - -
Sto10g0246 689 Coils Coil 98 118 - -
Sto10g0246 689 Gene3D - 334 514 IPR015943 GO:0005515
Sto10g0246 689 PANTHER DEM PROTEIN 1 629 - -
Sto10g0246 689 MobiDBLite consensus disorder prediction 1 48 - -
Sto10g0246 689 MobiDBLite consensus disorder prediction 29 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0246 Sto-Chr10 2033098 2037585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0246 48 632 Acyl Lipid Metabolism Gene Families AT3G19240 77.513 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0246 - - qsu:112024431 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0246 10 2033098 2037585 Sto10g0246 10 2033098 2037585 ECH