Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0235 ATGAGCGCCTCCGAGCCAGAGGGAATATGCTTCACCGAAGAGCAGGAAGCTCTTGTGGTCAAGTCTTGGGCCGTAATGAAGAAGAATTCCGGAGAGTTAGGTCTCAAGTTCTTCCTCAAAATATTTGAGATTGCTCCATCAGCTCAGAAATTGTTCTCCTTCCTCAAAGATTCAAAAGTCCCTTTGGAACAAAACCCAAAGCTCAAGCCTCATGCTGTCACTGTCTTTGTCATGACATGTGAATCAGCAGTTCAGCTGCGGAAGGCTGGTAAAGTGACAGTGAGGGAATCAAGCTTGAAAAAATTAGGTGCTGTCCATTTCAGAACTGGTGTGGTGGACGAGCATTTTGAGGTCACAAAGTTTGCACTGTTGGAAACCTTAAAAGAAGCAGTTCCAGAAATGTGGTCACCAGAAATGAAGAATGCATGGGGACAAGCTTATGATCAGCTTGTTGTCGCCATCAAAACTGAAATGAAACCTTCCTCTTAA 489 0.4438 MSASEPEGICFTEEQEALVVKSWAVMKKNSGELGLKFFLKIFEIAPSAQKLFSFLKDSKVPLEQNPKLKPHAVTVFVMTCESAVQLRKAGKVTVRESSLKKLGAVHFRTGVVDEHFEVTKFALLETLKEAVPEMWSPEMKNAWGQAYDQLVVAIKTEMKPSS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0235 162 ProSiteProfiles Globin family profile. 11 159 IPR000971 GO:0020037
Sto10g0235 162 CDD class1_nsHb-like 11 159 - -
Sto10g0235 162 PANTHER LEGHEMOGLOBIN-RELATED 7 161 IPR001032 GO:0019825|GO:0020037
Sto10g0235 162 SUPERFAMILY Globin-like 9 159 IPR009050 -
Sto10g0235 162 Pfam Globin 36 153 IPR000971 GO:0020037
Sto10g0235 162 PRINTS Plant globin signature 12 29 - -
Sto10g0235 162 PRINTS Plant globin signature 37 57 - -
Sto10g0235 162 PRINTS Plant globin signature 65 93 - -
Sto10g0235 162 PRINTS Plant globin signature 130 156 - -
Sto10g0235 162 ProSitePatterns Plant hemoglobins signature. 65 76 IPR019824 GO:0019825|GO:0020037
Sto10g0235 162 PANTHER HEMOGLOBIN 1, GLB1,NSHB1,ATGLB1,HB1 7 161 - -
Sto10g0235 162 Gene3D Globins 9 157 IPR012292 GO:0019825|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0235 Sto-Chr10 1977110 1977919 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0235 - - vri:117911306 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0235 10 1977110 1977919 Sto10g0235 10 1977110 1977919 ECH