Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0227 ATGCCGGAAGTTTACACCCTCAAGGTGGCCGAGGCAACTCCGGCCACCGCCGAGAAGCCGTCGGCTGGTCCTGTGTATAGGTGCATTTATGCTAAAGATGGTCTAATGGAGTTGCCTCCTGATTTACAATCTCCATCCCAATTCCTCAGGGACTCTGCTAAGAGGAACCCCACCAATCCAATTCTGGGTAGACGTCAAAAAACTGATTCCAAGGTTGGTCCCTATGTGTGGCTCACGTATCAGGAGGCTTATGATTCTGCCATCAGAATGGGTTCCGCCATGAGAAGCCGTGGCGTCAATCCTGGACATCGTTGTGGCATTTATGGATCAAACTGCCCCGAATGGATTATGGCAATGCAGGCGTGCAGTAGCTGTGCAGTAACATATGTTCCTCTATATGATACTCTTGGTCCTAATGCTGTGGAGTATATCATAAATCATGCTGAAGTTTCAATAGCATTTGTTCAGGAAAACAAGATTCCTTCTATTTTGTCATGTCTTGAACGGTGTTCTTCAAATCTAAAAACTATTGTGAGTTTTGGGAATGTTTCAACTGCACAAAGGAAGGGAGCTGAAGAACATGGTGCAACCTGTTTCTCCTGGGGAGAATTCCTTCAGATGGGAAGTTTAGATTGGGATCCACCATCAAAAAAGAAGACTGACATCTGCACAATAATGTACACAAGTGGAACAACTGGAGAACCCAAAGGTGTCATTATTAAGAATGAGGCTTTCATGGCAGAAGTGTTGTCTATTGACCAAATACTTTCGTTAACTGATAGAGTGGCAGCAGAAGACGATGTAtacttctcttttcttcctctagCTCATGTCTATGACCAGATAATGGAGACTTATTGCATCTACAAAGGCTCCTCAATAGGATTTTGGCAAGGCGATGTCAGGTTCTTGATGGAAGATGTTCAGATGCTTAAACCGACTATATTTTGTGGTGTTCCTAGAGTTTATGATCGCATTTATTCTGGTATCATGAGCAAAATTTCATCTGGAGGAGCATTGCAGAGTACATTCAAGTTAAAATATCTGGAGAAGGGACTTCCACAAGACAAAGCAGCACCTCTGTTTGATAGGCTTGTGTTTGATAAGATAAAACAAGCGTTAGGAGGACGAGTTCGAATCCTTTTATCAGGAGCTGCACCTCTGCCTAGGCATGTGGAGGAATTTCTGAGGGTCACTATTGGATCTACACTATCACAAGGATATGGTCTTACTGAAAGTTGCGGTGGGTGTTTGACAGCAATAGGGGATGTGTTTTCTATGATGGGAACAGTTGGTGTGCCAATGACAACCATTGAGGCCAGGCTTGAATCTGTGCCAGAAATGGGATATGATGCAGTTTCTGATCGACCGCGTGGAGAGATTTGCCTGAGAGGAACTACTTTGTTCTCCGGTTACCACAAGCGTCCGGATCTAACTCAGGAGGTGATAGTTGATGGGTGGTTTCATACAGGTGACATAGGAGAATGGCAGCCAGATGGAGCCATGAAAattattgacagaaaaaagaacatATTTAAGTTGTCTCAAGGAGAATATATTGCTGTTGAGAATATCGAGAACAAGTATTTGCAATGCCCTCTAATAGCTTCAATTTGGGTATATGGAAACAGTTTTGAGTCATTTCTTGTGGCTGTGGTGGTCCCTGAGAAAAAAGCAATTGAGGATTGGGCAGAAAAGCATAATTTGACAGGTGATTTTAGGTCTTTATGTGAAAACCTGAAAGCAAGAAAGTTCATTTTGGATGAGCTCAATAGCACTGGCCAGAAACACCAACTTAGAGGTTTTGAGATGCTAAAAGCAGTTTATCTTGAACCAATCCCCTTTGACATGGAGAGAGATCTAATAACTCCcacttttaaattgaagagaccACAATTACTCAACTACTATAAGGATCAAATTGATCAACTATATAAGGAAGCAAAGGAAAAGAAGATATGA 1962 0.4134 MPEVYTLKVAEATPATAEKPSAGPVYRCIYAKDGLMELPPDLQSPSQFLRDSAKRNPTNPILGRRQKTDSKVGPYVWLTYQEAYDSAIRMGSAMRSRGVNPGHRCGIYGSNCPEWIMAMQACSSCAVTYVPLYDTLGPNAVEYIINHAEVSIAFVQENKIPSILSCLERCSSNLKTIVSFGNVSTAQRKGAEEHGATCFSWGEFLQMGSLDWDPPSKKKTDICTIMYTSGTTGEPKGVIIKNEAFMAEVLSIDQILSLTDRVAAEDDVYFSFLPLAHVYDQIMETYCIYKGSSIGFWQGDVRFLMEDVQMLKPTIFCGVPRVYDRIYSGIMSKISSGGALQSTFKLKYLEKGLPQDKAAPLFDRLVFDKIKQALGGRVRILLSGAAPLPRHVEEFLRVTIGSTLSQGYGLTESCGGCLTAIGDVFSMMGTVGVPMTTIEARLESVPEMGYDAVSDRPRGEICLRGTTLFSGYHKRPDLTQEVIVDGWFHTGDIGEWQPDGAMKIIDRKKNIFKLSQGEYIAVENIENKYLQCPLIASIWVYGNSFESFLVAVVVPEKKAIEDWAEKHNLTGDFRSLCENLKARKFILDELNSTGQKHQLRGFEMLKAVYLEPIPFDMERDLITPTFKLKRPQLLNYYKDQIDQLYKEAKEKKI 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0227 653 ProSitePatterns Putative AMP-binding domain signature. 225 236 IPR020845 -
Sto10g0227 653 Gene3D - 36 507 IPR042099 -
Sto10g0227 653 Pfam AMP-binding enzyme 51 515 IPR000873 -
Sto10g0227 653 Pfam AMP-binding enzyme C-terminal domain 525 566 IPR025110 -
Sto10g0227 653 PANTHER LONG-CHAIN FATTY ACYL COA LIGASE 2 649 - -
Sto10g0227 653 CDD LC-FACS_euk 73 646 IPR045311 GO:0004467|GO:0006631
Sto10g0227 653 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 649 - -
Sto10g0227 653 SUPERFAMILY Acetyl-CoA synthetase-like 39 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0227 Sto-Chr10 1938757 1945618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0227 20 653 Acyl Lipid Metabolism Gene Families AT1G64400 54.984 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0227 K01897 - gmx:100795926 1140.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0227 10 1938757 1945618 Sto10g0227 10 1938757 1945618 ECH