Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0225 aTGAGGAAGACGAGGCCTTACTTGGCAATGAGAACTGATTACGAAGACGAAGCAATCCAATTGATCAACTCCGATCTCAGGGACTTAGGTCACGCCGCCACAAACCTCGCCAcggtttattttatttgtgtacTGTACTTTAGTTACCTGTTGATTTTGGATCGTACCAACTGGAAGACAAACATTCTTACATCACTACTGATTCCATACATTTTCCTGAGTCTTCCACCAGTAATTTTCAGCGCCTTCAGGGGAGAGTTTGGGAAATGGATAGCTTTTATTGCTGTTGTGTTACGGCTTTTCTTTCCAAGGCATTTCCCTGATTGGCTGGAATTGCCTGCTGCTTTGATTTTGCTTATAGTTGTGGCTCCTAGTCTATTTGCTAGCACCTTTAGAAGCGATTGGGTTGGAGTGACAATATGCCTCTTAATTGCATGTTATCTGCTGCAAGAACACATTCGAGCATCTGGTGGTTTCAGAAATTCCTTCACAAAGGCTCATGGCATATCAAATACAATTGGCATAATCCTTCTGTTAGTCTTTCCCGTTTGGACATTGGTACAATACATTTTATAG 576 0.408 MRKTRPYLAMRTDYEDEAIQLINSDLRDLGHAATNLATVYFICVLYFSYLLILDRTNWKTNILTSLLIPYIFLSLPPVIFSAFRGEFGKWIAFIAVVLRLFFPRHFPDWLELPAALILLIVVAPSLFASTFRSDWVGVTICLLIACYLLQEHIRASGGFRNSFTKAHGISNTIGIILLLVFPVWTLVQYIL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0225 191 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 6 189 - -
Sto10g0225 191 Pfam Cold acclimation protein WCOR413 29 178 IPR008892 GO:0016021
Sto10g0225 191 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 6 189 IPR008892 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0225 Sto-Chr10 1931966 1933829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0225 - - oeu:111381484 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0225 10 1931966 1933829 Sto10g0225 10 1931966 1933829 ECH