Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0222 ATGGCTTCGTTTCTGAGAAAATTGCGACCTAGTGTGTTGTCTTCTTCATCAGTTCATGATGATGGAGATGATTATAGTGTTGAATACTCGTTTGCCATAGAGTACAATGGCCCTCCTCTCAGTTTCTCCATCCCTGAAGCCACCCCTTTTAAGATTGAGCAAATACCACTTGCTTCTGTAGCTCCTTCTTTTTCTACTGCTCTATTTCCCGTTCCAATAATTCAACCCATTGTGAAAACTAACACAAATGTGAAACTGGATACAAATTCAAAATCTCCTGCTACTACTGAACTTGCTATCTCTGGCTCCAGCGAGTTAACCAATTCTGAATCTTTCTCAATTAGGGTTGAATCATCAAGTAGGGTAAATAAGTCATGTTCATTGAATAGAACTGATGATGCTGATAAGTGTAGCAGTGCAGGGAATTCGTCTCAGAGACTTCAAATTTCTGGCTCATTTGGAGTCTCTGGGAGAGGTGAAATTTGGCAGGTGTTGCCTGAAAGTGAAATGAATCCCACCAATTCGGATAAAACAGAGTCAGGTTCAACCTCTTGCTCAGTCTCTTCGGAGACTTTTTCATGCCGAGAAGATGATTGTAACAATGACACACCAAGGCATGTTAGACGGCCTTCTGCTGTGACTTTTCTTGATCCAGAGTCAGATCACATGGTagttaatgaaaattttgatggtTCTCAGGCTGCAAGTACCCCTATAGGGCCACGGGTTGAGAGACTTGGGAAGAAAGGCACATGCTATCGATGCAATGGAGGAAATCGGTTCACTGAGAAGGAGGTTTGCATTGTCTGTAGTGCAAAGTTTTGCCGAAAATGCGTTCTAAGAGCCATGGGGTGTATGCCTGAAGGAAGAAAATGTATCACTTGTATTGGTTGTAGAATTGATGAAAATAAGAGGAGAACCCAAGGAAAGTGTTCTAGGGTGCTCAAACAGTTGCTATCTGAGCAGGAAGTAAAACAAATAATGCATGCTGAATTGAATTGTGAAACTAATCAAATACCCCCGGAGCTAGTTTATGTGAATGAGGAAAATCTTGATCGAGATCAGCTAATTCTACTACAAAGCTGTCCAAAACCACCAAGAAAGCTAAAACCAGGCTCCTATTGGTATGATAAAGCTTCTGGATTTTGGGGAAAGGAAGGTCAAGCACCTTGTCAAATTATCAGTCCACAGCTGGATGTTGGAGGTACACTTCAAAGACATGCAAGCAATGGAAACACAAAAGTGCATATAAATGGCCGAGAAATTACTAAGAAAGAGCTCAGGATGCTAAAGATAGCAGGAGTCCCATGTGAAGGAACGCCTAACTTTTGGGTTAGTGCAGATGGGTCGTACCAGGAAGAGGGACAGAAGAATGTTAAGGAGCGGCGTATATGGGATAAGACAACGGTGAGGCTACTTTGTATGGTACTGTCTATGCCAGTTCCTTCTAACTCTGTAGCTGCTAGTGGTGAAGGTGAAGGAGAGAATAAAGTCAAAGGTTCTTTTGAACAGAGGAACCTTTACAAATTTCTTCTTGTTGGTTCAATCAAATCTGGAACAAGTACTATATTTAAACAGgccAGGGATCTTTATAACGTTCCTTTCACTGAAGATGAGCGCCAAAATATCAAGTTGGTGATCCAAAGCAACTTGTATACCTACCTTGCTATACTGCTGGAGGGGCGTGAAATTTTTGAAGAAGAGAGTTTATTGGAGAAGAGGAAAAGACAACTTGTCGATGAATCCACTTCAGCTGCAACAGGGAACACAGATGAAATTACTGATACAACAACAATCTATTCCATTGGCTCGAGACTGAAAGATTTCTCAGATCGGCTCCTCAAATATATGGTTTCCGGCAACTTGGATGCGATATTTCCAGATTCTACTTGGGAATGTGCTTCACTAGTAGAGGAGCTGTGGAGTGATGCTGCCATTCAGGCAACATACAACCGGAGAAATGAACTAGAAATGCTACCTAGAGGTGCAAGTTATTTTCTAGACCGGGCTGTTGAGATTTCAAAGGTAGACTATGAACCCTCCGACACTGACATCATGTATGCCGAAGGGATAACATTATCCAACAGTCTCACTTCGGTGGAATTTTCATTTCCGAAGACTAGTCACGAGGACTCTTTGGACCCAGCCTATCAGCATGACCCTTCTCTCATATACCAACTCATCAGAGTACATCCAAGAAGCCTTGGAGAAAACTGCAAGTGGTTGGAGATGTTTGAAGAGATCGATGTTGTCATATTCTGTGTTGCCTTAACTGACTATGATGAGTACACTGTAGACAGAAATGGAGTTTCCACCAACAAAATGTTGGCAGCTAAGCAATTATTCGAAAACATAATAACTCATCCATCCTTTGCAAACAAGAAATTCCTTTTGATTCTGACCAAATTTGACCTGCTCGAGGAAAAGATCGATGTGGTACCTCTAACAGAATGTGAATGGTTTAGTGACTTCAACCCAGTGATCAGCAATAACCAAAACAGATCCAATAATTATACCACTAATCCTCCATTAGTTCAACGTGCTTTTCAATATATTGCTGTCAAGTTCAAGAAACTATGCTATTCTCTTACGAGCCAGAAGCTGTTCGTGTCACTGGTTAATGGATTGGAACCTGATACTGTTGATGAATCCCTCAGATATGCTAGAGAGATTATGTTATGGCAGAAATGGTTTCCTTCTCTCTCAGCTGATCAGAAGTCTGAGAATGAGATTACTACAACATCCTATGATGAGCAAAGCTCTTAA 2766 0.4111 MASFLRKLRPSVLSSSSVHDDGDDYSVEYSFAIEYNGPPLSFSIPEATPFKIEQIPLASVAPSFSTALFPVPIIQPIVKTNTNVKLDTNSKSPATTELAISGSSELTNSESFSIRVESSSRVNKSCSLNRTDDADKCSSAGNSSQRLQISGSFGVSGRGEIWQVLPESEMNPTNSDKTESGSTSCSVSSETFSCREDDCNNDTPRHVRRPSAVTFLDPESDHMVVNENFDGSQAASTPIGPRVERLGKKGTCYRCNGGNRFTEKEVCIVCSAKFCRKCVLRAMGCMPEGRKCITCIGCRIDENKRRTQGKCSRVLKQLLSEQEVKQIMHAELNCETNQIPPELVYVNEENLDRDQLILLQSCPKPPRKLKPGSYWYDKASGFWGKEGQAPCQIISPQLDVGGTLQRHASNGNTKVHINGREITKKELRMLKIAGVPCEGTPNFWVSADGSYQEEGQKNVKERRIWDKTTVRLLCMVLSMPVPSNSVAASGEGEGENKVKGSFEQRNLYKFLLVGSIKSGTSTIFKQARDLYNVPFTEDERQNIKLVIQSNLYTYLAILLEGREIFEEESLLEKRKRQLVDESTSAATGNTDEITDTTTIYSIGSRLKDFSDRLLKYMVSGNLDAIFPDSTWECASLVEELWSDAAIQATYNRRNELEMLPRGASYFLDRAVEISKVDYEPSDTDIMYAEGITLSNSLTSVEFSFPKTSHEDSLDPAYQHDPSLIYQLIRVHPRSLGENCKWLEMFEEIDVVIFCVALTDYDEYTVDRNGVSTNKMLAAKQLFENIITHPSFANKKFLLILTKFDLLEEKIDVVPLTECEWFSDFNPVISNNQNRSNNYTTNPPLVQRAFQYIAVKFKKLCYSLTSQKLFVSLVNGLEPDTVDESLRYAREIMLWQKWFPSLSADQKSENEITTTSYDEQSS 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0222 921 SUPERFAMILY Transducin (alpha subunit), insertion domain 535 688 IPR011025 GO:0007165
Sto10g0222 921 CDD G-alpha 508 895 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto10g0222 921 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 504 897 IPR027417 -
Sto10g0222 921 MobiDBLite consensus disorder prediction 131 151 - -
Sto10g0222 921 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 19 913 - -
Sto10g0222 921 PRINTS Alpha G protein (transducin) signature 509 524 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto10g0222 921 PRINTS Alpha G protein (transducin) signature 678 700 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto10g0222 921 PRINTS Alpha G protein (transducin) signature 748 776 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto10g0222 921 PRINTS Alpha G protein (transducin) signature 796 805 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto10g0222 921 Gene3D - 687 898 IPR027417 -
Sto10g0222 921 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 19 913 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto10g0222 921 Pfam G-protein alpha subunit 503 891 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto10g0222 921 ProSiteProfiles G-alpha domain profile. 506 904 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto10g0222 921 SMART galpha_1 488 893 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Sto10g0222 921 Gene3D - 536 686 IPR011025 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0222 Sto-Chr10 1894105 1898991 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0222 - - gmx:112997598 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0222 10 1894105 1898991 Sto10g0222 10 1894105 1898991 ECH