LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sto10g0216	ATGAAGCCCATGGATACTATATGTGATCTGATTGAAGAGGCCAAGGTCCGAACTGTTTGGTGGGCCCTCTTTATATTCGCCATTACTTATTTCTTAACTCATACGAGTAAGTCAATGTGGATGAATATACCCATCTCAATTCTGTTTGTGTCTGCACTACGCATTCTTTTGAATAAGGTGGAGTTTCGATGGAAAGTTAAACCACCTGCATCACAGACATATTTATCTCATTTGGAGAAGAAACAGTTATCTCTAAATGATTCACGCCTCTCTACTCCACCTCCCCCAGCAAAATGGAAGAGAAAAATTGATTCTCCTGTTGTGGAGGCTGCAGTCAATGATTTCattgaaaaaatattgaagGATTTTGTGACAGATTTATGGTATGCAGATATAACTCCAGATAGAGAGTTTCCTCGGCATATACATGCAATAATCATGGATGCTCTTGGTGAAATATCCGGAAGGCTTAAGGAGATAAACCTTGTTGACTTACTGTCCAGGGATATAATTGATCTGGTAGGTGATCACTTAGATCTTTTCAGAAGAAATCAAGCTGCTATAGGTGTTGATGTTATGTTAACATTATCATCTGAGGAGAGGGATGAAAGATTGAAATATCATCTGCTGAATTCTAAGGAGCTTCATCCTGCACTTATATCTCCTGAGAGTGAGTACAAGGTTCTACAGCGGCTAATGGGTGGTGTACTTGCTATAGTACTCAGGCAACGAGAAGCTCAATGTCCTGTTATTCGATCTATAGCTAGGGAACTATTGACCTGCTTGGTAATGCAACCTATCATGGATTTGGCAAGCCCTGGGTATATCAATGAACTGATCGAATCCCTACTTCTTGTCATTAATGATTGCGGCACAGTCGGGGCAGCCAGTGATCAATCTTCTAATGCAGCAAGTCAACATCATGGTCATTCTGTTGTTGCTGGGGGTGGTCATGTTGATAAAACAGCCTTGAAAAAGCCTCCATCTTTAAACCAACAGGCTGATATGACATTGGCCAAAATGCATTATCAGCAAGATCGTTTACAGGTTAAGCATGCTGATTGGGCACGGATGTTGGACGCTGCAACTCAGAAAAGAACTGAAGTTCTTATGCCAGAGAATCTCGAGAATATGTGGACAAAAGGAAGGaattacaaaaagaaagagaacaaaaaaCTGAAAGCAAGCACTCAGGATCTTTCTGCAAAAAGTCCTGCTACAGACAGTGTAGTGCCTGTTAGAAATTTGACTAACGAAAAGTCAGCAAGTAATCCAGGAAAGTATGCGAATCAAGACGACAAGTGCCTGCAGGCAATGCCGTCCTTGAATCCTGATCCCCTAATAAATGTTCAGAGCACAAATAAGTTGCAGTCTTTTCAGAATCCTGACAAGGAGTTGTTTGAGGGAGAGCATCAAGTTGATGCAGTTAAGGATACGGAGGTGCTTTCTCATAAAAGTCGGCTGAAAAGGTCCAACAGTACTTCTGACTTGGGAATTCAACCACAGAAAGAGGGAGGCCCTATAATTTCGGAAGGGGCAACTATTTCCCAAGCTTCGTTGTCGGGTATGCATCTTGTCTGTGATAGTTATGAGATATACTATTTTGGAGAGTATAGAGTATACTACATGAAGAAGATTATAGCTCTTGTTATGGGAGCATATTTTGAGAAACTCGGGTCCAAATCTTTTGCTGTTTATTCAATTGCAGTGACAGATGCACTAAACAAAACTTGGTTTGTGAAAAGAAGATACAGAAATTTTGAGCGATTGCATCGGCATCTAAAAGATATTCCAAATTACACGTTACATTTGCCTCCTAAAAGGATATTTTCCTCAAGCACAGAGGATGCTTTTGTCCATCAGCGTTGCATTCAGCTTGATAAATACCTCCAGGATCTCCTATCGATAGCTAATGTTGCAGAACAACATGAAGTATGGGACTTTTTGAGTGTTTCTTCAAAGAACTACTCGTTTGGGAAATCTTCTTCAATGATGAAGACCCTGGCAGTCAATGTGGATGATGCTGTGGATGATATTGTACGCCAGTTTAAAGGGGTTTCAGATGGTTTAATGAGAAAAGTTGTTGGTTCAACATCCCCCACTAATGAAGGTTCTTCAACATCTACCACATGGAACTTGTCCTGGAACTCCGATGAATTAGATAAAAGTATTCCACGGCAAAATATGGCAGAAACCGTctcaaagggatATCCACCACAGGAAATTAACCATGCTGAAGAGATTCAGTTACTGTGCCACCTGAGCTGCCAACTTGAGATAAAGCTGGTTCCTAGATGCTTGCGGGCTGCACTAGAGATAAATTCCACCATTAGCATGTTAGTGATGGAAGATGCTATTGATGATTGGCTCCTAAGGCAGATTAATTTGCTCCGGCAAGAGGAAACTATTGCCCAAGGAATTCGATTGAAGCCAATAAGGAGTTTCCTTaaacaaAATTTCAATCTTCCTGTCCTTAACTTTCTTTACATGATCTTGCAGAGGACTCAGACAGGTCTTCTCAATATTTATTTGTTAAAAATCTCTTTCCCATTGTTGTATTTACTTGTGCAAGATGCGAAATCTAATTGTGCACTTCAGCAGATCCCTTGGTACCAGGAATCAAGAACATTGAGGGTGATTCTTAGATGGCTCATTCACatTGAAACTAGTAATGGTTACTTCATTCGCTATAAAGTTAGGGCTGATGGTAAGAAGGGAGATCTCATCAACCTTTGGCCGGAAGATGGCAAGTTCTGCACCTTTTCCGGCGAGGCCGAGGCGGCGAACATGGGCTATAAACATCATTTGTCAACTCTCATGAAAGCCTCTTCATTGAAGCATCTTgagttatgtggcacaattgtagctattatCGTAATATTAGGTTATCTAAAGAAGAAgagaaagtgtgtgtgtgtgtatCTTATTCTTTCATCCACCGTTCAGGCCAGACAACTGACTAGTGAAtTCCTTCAAAACTGTCTGGTTCTTTGCTTTCTTGAAATTGTGGACCTTGTGAAAGTTCATCAGGAGAAAACTATAGGAATAGATAGAATCATGCATTTTGGGTCTTCATAA	3078	0.3944	MKPMDTICDLIEEAKVRTVWWALFIFAITYFLTHTSKSMWMNIPISILFVSALRILLNKVEFRWKVKPPASQTYLSHLEKKQLSLNDSRLSTPPPPAKWKRKIDSPVVEAAVNDFIEKILKDFVTDLWYADITPDREFPRHIHAIIMDALGEISGRLKEINLVDLLSRDIIDLVGDHLDLFRRNQAAIGVDVMLTLSSEERDERLKYHLLNSKELHPALISPESEYKVLQRLMGGVLAIVLRQREAQCPVIRSIARELLTCLVMQPIMDLASPGYINELIESLLLVINDCGTVGAASDQSSNAASQHHGHSVVAGGGHVDKTALKKPPSLNQQADMTLAKMHYQQDRLQVKHADWARMLDAATQKRTEVLMPENLENMWTKGRNYKKKENKKLKASTQDLSAKSPATDSVVPVRNLTNEKSASNPGKYANQDDKCLQAMPSLNPDPLINVQSTNKLQSFQNPDKELFEGEHQVDAVKDTEVLSHKSRLKRSNSTSDLGIQPQKEGGPIISEGATISQASLSGMHLVCDSYEIYYFGEYRVYYMKKIIALVMGAYFEKLGSKSFAVYSIAVTDALNKTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFLSVSSKNYSFGKSSSMMKTLAVNVDDAVDDIVRQFKGVSDGLMRKVVGSTSPTNEGSSTSTTWNLSWNSDELDKSIPRQNMAETVSKGYPPQEINHAEEIQLLCHLSCQLEIKLVPRCLRAALEINSTISMLVMEDAIDDWLLRQINLLRQEETIAQGIRLKPIRSFLKQNFNLPVLNFLYMILQRTQTGLLNIYLLKISFPLLYLLVQDAKSNCALQQIPWYQESRTLRVILRWLIHIETSNGYFIRYKVRADGKKGDLINLWPEDGKFCTFSGEAEAANMGYKHHLSTLMKASSLKHLELCGTIVAIIVILGYLKKKRKCVCVYLILSSTVQARQLTSEFLQNCLVLCFLEIVDLVKVHQEKTIGIDRIMHFGSS	1025

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sto10g0216	1025	PANTHER	PX SERINE/THREONINE KINASE PXK	818	1010	-	-
	Sto10g0216	1025	PANTHER	PX SERINE/THREONINE KINASE PXK	3	733	-	-
	Sto10g0216	1025	PANTHER	PX SERINE/THREONINE KINASE PXK	768	809	-	-
	Sto10g0216	1025	SMART	PX_2	544	652	IPR001683	GO:0035091
	Sto10g0216	1025	MobiDBLite	consensus disorder prediction	297	325	-	-
	Sto10g0216	1025	Gene3D	-	544	661	IPR036871	GO:0035091
	Sto10g0216	1025	Pfam	PX domain	575	651	IPR001683	GO:0035091
	Sto10g0216	1025	Pfam	PXA domain	105	283	IPR003114	-
	Sto10g0216	1025	PANTHER	SORTING NEXIN CARBOXY-TERMINAL PROTEIN	818	1010	-	-
	Sto10g0216	1025	PANTHER	SORTING NEXIN CARBOXY-TERMINAL PROTEIN	768	809	-	-
	Sto10g0216	1025	PANTHER	SORTING NEXIN CARBOXY-TERMINAL PROTEIN	3	733	-	-
	Sto10g0216	1025	ProSiteProfiles	PXA domain profile.	105	287	IPR003114	-
	Sto10g0216	1025	MobiDBLite	consensus disorder prediction	386	432	-	-
	Sto10g0216	1025	MobiDBLite	consensus disorder prediction	397	430	-	-
	Sto10g0216	1025	SMART	PXA_3	105	288	IPR003114	-
	Sto10g0216	1025	ProSiteProfiles	PX domain profile.	544	656	IPR001683	GO:0035091
	Sto10g0216	1025	MobiDBLite	consensus disorder prediction	484	505	-	-
	Sto10g0216	1025	CDD	PX_SNX19_like_plant	550	650	-	-
	Sto10g0216	1025	SUPERFAMILY	PX domain	549	653	IPR036871	GO:0035091

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sto10g0216	Sto-Chr10	1816230	1833355	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sto10g0216	K17925		-	gmx:100793613	978.393

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Sto10g0216	10	1816230	1833355	Sto10g0216	10	1816230	1833355	ECH