Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0198 ATGGAGCTCAAACCTGGTTTGTCTGCCCTGGTCACTGGGGGTGCCTCTGGAATAGGAAAAAGTCTTTGCCTAGCTCTTGCAGAGAAGGGTATATTTGTCACAGTCGTTGATTTCTCTGAAGAAAAGGGGAGAGAAGTCGCATCCCTTGTTGAGAAAATTAATGCCAAGTTTCATTCCAAGTTAGAACATCCGTCTTCTATATTTGTGAGATGTGATGTGTCTAACACAAGGGATATAGCTGTTGCATTTGAGAAGCATGCTGTGACATATGGAGGACTGGACATTTGTATCAACAGTGCAGGGATTGGTAATCCTATACCTTTCAATAAGGATAAAACAGATGGCACTCACTCATGGAATCATGCTATCAATGTGAATTTGAATGCTGTTATTCATTGCACTAGCCTAGCGATTAGAATCATGGAAGCTTCCAAAAGGCCTGGGGTGATTATCAATATGGGTTCTGCTTCCGGTCTTTATCCAATGTACACTGACCCTATCTATTCTGCCTCCAAAGGTGGTGTTATTATGTTTTCTAGAGCACTTAGGCCATACAAACGCCAAGGAATCCGAGTCAATGTGCTTTGCCCTGAGTTTGTTCAAACTGATATGGGCGCCATGGTGAGTTCTCGACTGGTCAGTCTGATGGGGGGCTTTGTACCTATGGAAATGGTTGTGAAAGGTGCTTTTGAGCTTATTATGGATGAGAGCAAAGCTGGTTCATGCTTATGGATTACAAATCGCCTTGGAATGCAGTACTGGCCCACCCCATTAGAAGAAGAAAAGTACTTGGTAAACTCCTCAAGTTTTAGAAAAGGATCTGAGTTCAAAGCACCACCAATTACACTCCCTGAGAATTTTGATAAAGTAGTTGTTCACACCTTGACTCACAAATTTCGAAATGCTACCAGCATAGTGAGAACACCACTGAGATTACCTGTCAAACCACATTATGTTCTTGTGAAGTTGATTTATGCTGGTGTAAATGCTAGTGATGTAAATTTCAGCTCAGGCCGCTATTTCAGTGGCAAGGACAGAGATGTGGCTTCTCTTCTTCCATTTGATGCCGGTTTTGAGGCTGTAGGAATAATTGCAGCAGTTGGGGATTCTGTCACTGACTTAAAAGTTGGCATGCCTTGTGCGGTCATGACATATGGAGGGTATTCTGAATTCCTAATGGTTCCTTCAAAACGGGCCCTTCCAGTGGCTAGACCAGATCCAGAAGTTGTTGCCATGCTTACCTCAGGACTAACAGCCTCAATCGCTCTTGAAAAGGCGGGACAAACCGAATCTGGAAAAGTAGTCCTTGTTACTGCTGCTGCTGGAGGGACTGGGCAATTTGCTGTTCAGCTTGCAAAATTAGCAGGAAATAAAGTGGTTGCAACTTGTGGAGGTGGGGCAAAGGCCAAGCTTCTCAAAGAATTGGGAGTTGACAGAGTCATAGACTATAAAAGTGAAGATATTAAAACTGTTCTGAGTAAAGAGTTCCCAGAAGGCATTGACATCATCTATGAGTCTGTTGGTGGTGACATGCTCAAGTTGTGCTTGAATGCTTTAGCAATCCATGGACGACTGATAGTGATAGGAATGATTTCTCAGTATCAAGGAGAGCATGGTTGGGAGCCATCGAAGTACCCTGGACTATTGGAGAAGCTCTTATCAAAGAGCCAGACTGTGGCTGGCTTTTTTCTGATACAATATAGTCATTTGTGGCGACAACATCTTGACAGACTAGTTAACCTTTACTACAAGGGAAAACTAAAGGTTGCTTTAGATCCAAAGCCATTTTTAGGTCTACATTCTGTTGCAGATGCAGTTGAGTATCTCCATTCAGGCAAAAGTGTTGGGAAGGTTGTTGTCTGCCTTGACCCTGCCTTCCACAATCAAATAGCCAAATTATGA 1902 0.4311 MELKPGLSALVTGGASGIGKSLCLALAEKGIFVTVVDFSEEKGREVASLVEKINAKFHSKLEHPSSIFVRCDVSNTRDIAVAFEKHAVTYGGLDICINSAGIGNPIPFNKDKTDGTHSWNHAINVNLNAVIHCTSLAIRIMEASKRPGVIINMGSASGLYPMYTDPIYSASKGGVIMFSRALRPYKRQGIRVNVLCPEFVQTDMGAMVSSRLVSLMGGFVPMEMVVKGAFELIMDESKAGSCLWITNRLGMQYWPTPLEEEKYLVNSSSFRKGSEFKAPPITLPENFDKVVVHTLTHKFRNATSIVRTPLRLPVKPHYVLVKLIYAGVNASDVNFSSGRYFSGKDRDVASLLPFDAGFEAVGIIAAVGDSVTDLKVGMPCAVMTYGGYSEFLMVPSKRALPVARPDPEVVAMLTSGLTASIALEKAGQTESGKVVLVTAAAGGTGQFAVQLAKLAGNKVVATCGGGAKAKLLKELGVDRVIDYKSEDIKTVLSKEFPEGIDIIYESVGGDMLKLCLNALAIHGRLIVIGMISQYQGEHGWEPSKYPGLLEKLLSKSQTVAGFFLIQYSHLWRQHLDRLVNLYYKGKLKVALDPKPFLGLHSVADAVEYLHSGKSVGKVVVCLDPAFHNQIAKL 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0198 633 SUPERFAMILY GroES-like 296 436 IPR011032 -
Sto10g0198 633 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 254 IPR036291 -
Sto10g0198 633 Pfam Zinc-binding dehydrogenase 443 578 IPR013149 -
Sto10g0198 633 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 432 453 IPR002364 GO:0008270|GO:0016491
Sto10g0198 633 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 155 183 IPR020904 GO:0016491
Sto10g0198 633 PANTHER BNAA08G02470D PROTEIN 93 631 - -
Sto10g0198 633 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 93 631 - -
Sto10g0198 633 Gene3D - 411 589 - -
Sto10g0198 633 CDD Mgc45594_like 286 621 - -
Sto10g0198 633 Gene3D - 6 242 - -
Sto10g0198 633 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 IPR002347 -
Sto10g0198 633 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 IPR002347 -
Sto10g0198 633 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 168 187 IPR002347 -
Sto10g0198 633 Pfam short chain dehydrogenase 9 208 IPR002347 -
Sto10g0198 633 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Sto10g0198 633 PRINTS Glucose/ribitol dehydrogenase family signature 91 102 IPR002347 -
Sto10g0198 633 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Sto10g0198 633 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Sto10g0198 633 PRINTS Glucose/ribitol dehydrogenase family signature 188 205 IPR002347 -
Sto10g0198 633 SMART PKS_ER_names_mod 307 620 IPR020843 GO:0016491
Sto10g0198 633 Pfam Alcohol dehydrogenase GroES-like domain 317 383 IPR013154 -
Sto10g0198 633 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 408 586 IPR036291 -
Sto10g0198 633 Gene3D - 292 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0198 Sto-Chr10 1633951 1644018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0198 10 222 Acyl Lipid Metabolism Gene Families AT1G24360 32.870 7.38e-24 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0198 - - gmx:100797559 1035.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0198 10 1633951 1644018 Sto10g0198 10 1633951 1644018 ECH