Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0191 ATGGCTGATGCTACTACAGCAGAGAAGAGTCTTAAggattttgatcctcaaaagAAACCCAAAAGGAACAAGTATGCTTTTGCTTGCGCCATTTTGGCCTCCATGACTTCCATCTTACTTGGTTATGATATAGGAGTGATGAGTGGAGCAGCAATATACATAAAAAGAGACCTGAAAGTTACGGACGTGCAAATCGAGATCCTGCTTGGAATCATCAACCTGTATTCTCTGATAGGTTCTTGCCTCGCCGGAAGAACCTCCGATTGGATCGGTCGCCGCTACACCATCGTTTTCGCCGGAGCGATCTTCTTCGCCGGAGCAATTCTGATGGGATTCTCGACCAACTATTTGTTCCTGATGTGCGGCCGCTTCGTCGCCGGCATTGGAATCGGCTACGCTCTGATGATCGCCCCCGTCTACACCGCCGAGGTCTCGCCGGCGTCGTCTCGTGGCTTTCTCACTTCCTTCCCTGAGGTTTTCATCAATGGAGGAATACTACTTGGCTACATTTCAAACTACGCATTCTCGAAGCTACCACTTCGCATAGGCTGGCGGCTCATGCTAGGAATCGGCGCGGTTCCTTCAGTAATCCTAGGCGTGGGTGTTCTAGCCATGCCAGAGTCCCCTCGATGGCTCGTAATGCGCGGTCGGCTCGGCGAAGCCAAGCAAGTCCTGAACAAGACCTCAGACTCCAAAGAAGAGGCTCGGCTAAGGCTAGCCGACATCAAACAAGCCGCCGGAATCCCCGAGAATTGCGACGACGACGTCGTTGAAGTGGCCGGAAAACAAAACACAGGCGAAGGCGTATGGAAAGAACTCTTCCTCCATCCAACGCCAGCCGTCCGTCACATCTTAATCGCAGCCCTTGGAATCCACTTCTTCCAGCAAGCCTCAGGCGTAGACGCCGTCGTTTTGTACAGTCCCACAATATTCCAAAAGGCGGGAATCACGTCGGATACGGATAAGCTCCTCGCGACCGTGGCCGTTGGATTCGTCAAGACGATCTTCATCTTAGTGGCCACCTTCATGTTGGATCGGGTCGGGCGTCGCCCGTTGCTTTTGAGTAGCGTCGGGGGTATGATATTCTCGCTTCTTACTCTCGCCTTGAGCCTCACGATTATTGATCATTCCAAGACTAAGTTGATGTGGGCCGTTGGATTGAGTATAGCCACTGTGTTATCCTACGTTGCGACGTTTTCGATCGGTGCGGGTCCCATCACGTGGGTCTATAGCTCCGAGATCTTTCCGTTGAAGCTACGCGCTCAGGGTGCGGCTATGGGAGTGGTGGTGAATAGGGTGACAAGTGGGGTTATTTCAATGACCTTTTTGTCCTTGCAGAAGGCCATTACTATAGGTGGGGCCTTCTTTCTCTTTGGGTCTATTGCCACCGTTGGATGGATCTTTTTCTATGTCATGCTTCCTGAAACGCAGGGTAAGACACTTGAGGAGATGGAAGGGTCTTTTGGTAAATTTAGAAGCTCAAGCTCAACCAAAGGAGTTAACGGTAACGATGGTAAGGGTAAAGATAACGGTAACGGCCAAATCCAATTGAATTAG 1557 0.5048 MADATTAEKSLKDFDPQKKPKRNKYAFACAILASMTSILLGYDIGVMSGAAIYIKRDLKVTDVQIEILLGIINLYSLIGSCLAGRTSDWIGRRYTIVFAGAIFFAGAILMGFSTNYLFLMCGRFVAGIGIGYALMIAPVYTAEVSPASSRGFLTSFPEVFINGGILLGYISNYAFSKLPLRIGWRLMLGIGAVPSVILGVGVLAMPESPRWLVMRGRLGEAKQVLNKTSDSKEEARLRLADIKQAAGIPENCDDDVVEVAGKQNTGEGVWKELFLHPTPAVRHILIAALGIHFFQQASGVDAVVLYSPTIFQKAGITSDTDKLLATVAVGFVKTIFILVATFMLDRVGRRPLLLSSVGGMIFSLLTLALSLTIIDHSKTKLMWAVGLSIATVLSYVATFSIGAGPITWVYSSEIFPLKLRAQGAAMGVVVNRVTSGVISMTFLSLQKAITIGGAFFLFGSIATVGWIFFYVMLPETQGKTLEEMEGSFGKFRSSSSTKGVNGNDGKGKDNGNGQIQLN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0191 518 ProSitePatterns Sugar transport proteins signature 2. 125 150 IPR005829 GO:0016021|GO:0022857|GO:0055085
Sto10g0191 518 Pfam Sugar (and other) transporter 29 486 IPR005828 GO:0016021|GO:0022857|GO:0055085
Sto10g0191 518 Gene3D MFS general substrate transporter like domains 19 491 IPR036259 -
Sto10g0191 518 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 13 507 IPR045262 GO:0015144
Sto10g0191 518 PANTHER SUGAR TRANSPORTER 13 507 - -
Sto10g0191 518 TIGRFAM SP: MFS transporter, sugar porter (SP) family 12 484 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto10g0191 518 ProSitePatterns Sugar transport proteins signature 1. 83 100 IPR005829 GO:0016021|GO:0022857|GO:0055085
Sto10g0191 518 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 477 IPR020846 GO:0022857
Sto10g0191 518 MobiDBLite consensus disorder prediction 489 518 - -
Sto10g0191 518 SUPERFAMILY MFS general substrate transporter 15 485 IPR036259 -
Sto10g0191 518 CDD MFS_PLT 32 484 IPR044776 GO:0005351
Sto10g0191 518 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto10g0191 518 PRINTS Sugar transporter signature 120 139 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto10g0191 518 PRINTS Sugar transporter signature 295 305 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto10g0191 518 PRINTS Sugar transporter signature 389 410 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto10g0191 518 PRINTS Sugar transporter signature 412 424 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto10g0191 518 Coils Coil 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0191 Sto-Chr10 1570377 1573150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0191 16 518 Organic Solute Cotransporters AT3G18830 73.757 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0191 - - gmx:100800461 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0191 10 1570377 1573150 Sto10g0191 10 1570377 1573150 ECH
Sto2g0690 2 5847721 5851993 Sto10g0191 10 1570377 1573150 ECH