Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0177 ATGTTAGGACATAATTCGCAATCCGAGTACTCTCCTTTTTTGGGAATTGAAAAGGGAGCTGTTCTTCAGGAAGCAAGGGTTTTTAATGACCCACAACTAGATGCTAGGAGATGTTCACAGGTCATCACAAAACTTTTATACCTACTGAATCAGGGCGAGACATTTACCAAGATTGAAGCCACCGAAGTTTTCTTTGCTGTAACTAAGCTCTTCCAGTCTAGAGATATTGGGTTGAGGAGAATGGTCTACCTGATGATAAAGGAGCTTTCTCCCTCTGCAGATGAGGTTATTATTGTGACAAGCTCTCTCATGAAGGACATGAATAGCAGAACCGACATGTACAGGGCAAATGCCATTCGTGTGCTTTGTCGTATTACGGATGGAACCCTCCTTACCCAGATTGAGAGGTATTTGAAACAGGCAATTGTAGATAAGAATCCAGTCGTTGCAAGTGCAGCACTAGTTAGTGGAATACATATACTCCAGACAAATCCTGAGATTGTGAAAAGGTGGAGCAATGAGGTTCAGGAAGCTGTTCAATCAAGAGCAGCTCTTGTGCAGTTTCATGCACTGGCTTTGCTACATCAGATAAGACAGAATGATCGGCTAGCAGTTAGCAAGTTGGTTACCAGTTTGACCAGGGGAACTGTTCGCTCACCTTTGGCCCAATGCCTTTTGATTCGTTATACAAGTCAGGTTATTCGTGAATCAGGCAATAATACACAAACAGGGGACCGCCCATTTTATGATTATCTTGAGAGTTGCCTTCGTCATAAGTCAGAAATGGTGATTTTTGAAGCTGCCAGAGCCATTACAGAGCTCAACAGTGTAACAACCCGGGAATTAACTCCAGCAATTACTGTTCTTCAGCTCTTCTTAAGTTCTTCTAAGCCAGTCTTGAGATTTGCTGCTGTCCGCACATTGAACAAGGTGGCAATGACACATCCAATGGCCGTCACAAACTGCAACATTGATATGGAAAGTTTGATCTCTGACCAGAACAGAAGCATTGCCACACTTGCAATAACTACACTTTTGAAGACAGGAAATGAGTCAAGTGTGGATCGTCTCATGAAGCAGATTACGAATTTCATGTCAGATATTGCTGATGAGTTCaaaattgttgttgttgatgcCATAAGATCATTGTGTTTGAAGTTTCCATTGAAATATCGATCTCTGATGAACTTCCTGAGTAATATTCTAAGGGAAGAAGGTGGGTTTGATTACAAGAAGGCAATTGTAGATTCAATTGTGATTCTCATAAGAGATATCCCAGATGCAAAAGAAAGCGGGTTGCTTCATCTTTGTGAGTTCATTGAAGATTGTGAATTCACCTATTTGTCCACACAGATACTGCACTTCCTGGGAGTTGAAGGACCAAAAACATCAGACCCCAGCAAATATATACGTTACATATATAACAGAGTGCATCTTGAGAATGCAACTGTTAGGGCTAGTGCTGTGAGCACTTTGGCAAAGTTTGGTGCTGCAGTTGATTCATTGAAGCCCCGGATATTTGTTCTGCTGAGGCGATGTCTTTTTGACAGCGATGATGAGGTTCGTGATAGGGCAACACTCTATCTTAATACACTTGGAGGTGATGGTGCAGTTGTTGAGACTGATAAAGATGTTAAGGACTTCCTCTTTGGGTATTTTGATATACCCCTTGTGAATCTGGAGactagtttaaaaaattatGAACCTTCCGAAGAACCTTTTGACATAAACTCTGTGCCTAAGGAGGTTAAGTCTCAACCGCTTGCAGAGAAGAAGGCACCGGGTAAAAAGCCAACTGGTTTGGGTGCTCCTCCAAGTGGCCCACCATCAACTGAAGATGCATATGAAAGGCTGCTGTCCTCAATTCCTGAGTTTGCTAACTTTGGGAAGCTTTTCaagTCCTCACCACCCGTGGAGCTTACTGAAGCAGAGACAGAATATGCAGTTAATGTTGTTAAACACATCTTTGATAGGCATGTTGTGTTCCAGTACAACTGCACAAACACAATACCAGAGCAATTACTGGAAAATGTTACTGTAATTGTAGATGCCTCGGAAGCAGAGGAGTTCTCTGAGGTTCTTTCCAAGCCTCTCAGATCCCTTCCTTATGACTCGCCTGGACAGACATTTGTGGCTTTTGAGAAGCCAGAAGGATTGCCAACAGTTGGAAAATTTTccaatgttttgaaatttatcGTTAAAGAGGTTGACCCCTCCACCGGTGAAGCAGAAGACGATGGTGTGGAAGATGAATACCAGCTGGAAGATTTGGATGTTGTTTCAGCCGATTACATATTGAAAGTGGGGGTGTCTAATTTTAGAAATGCATGGGAAAACATGGATCCTGAAAGTGAGCGAGTGGATGAATATGGTCTTGGCCCAAGGGAGAGCTTGGCTGAAGCTGTAAATACTGTCATCAATCTTCTTGGCATGCAGCCCTGTGAGGGCACAGAAGTTGTCCCACCCAATTCAAGGTCACACCAATGTTTATTGTCCGGAGTATTCATAGGGAATGTGAAGGTGCTCGTGCGCTTGTCTTTTGGCGTCGATGGTGCAAAGGATGTTGCGATGAAACTGGCCGTTAGATCTGAAGATGAATCTGTCAGTGATACCATTCACGAGATTGTGGCAAGCGGTTAG 2640 0.4239 MLGHNSQSEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMNSRTDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHILQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTSQVIRESGNNTQTGDRPFYDYLESCLRHKSEMVIFEAARAITELNSVTTRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVDAIRSLCLKFPLKYRSLMNFLSNILREEGGFDYKKAIVDSIVILIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFLGVEGPKTSDPSKYIRYIYNRVHLENATVRASAVSTLAKFGAAVDSLKPRIFVLLRRCLFDSDDEVRDRATLYLNTLGGDGAVVETDKDVKDFLFGYFDIPLVNLETSLKNYEPSEEPFDINSVPKEVKSQPLAEKKAPGKKPTGLGAPPSGPPSTEDAYERLLSSIPEFANFGKLFKSSPPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLENVTVIVDASEAEEFSEVLSKPLRSLPYDSPGQTFVAFEKPEGLPTVGKFSNVLKFIVKEVDPSTGEAEDDGVEDEYQLEDLDVVSADYILKVGVSNFRNAWENMDPESERVDEYGLGPRESLAEAVNTVINLLGMQPCEGTEVVPPNSRSHQCLLSGVFIGNVKVLVRLSFGVDGAKDVAMKLAVRSEDESVSDTIHEIVASG 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0177 879 Gene3D - 761 877 IPR012295 -
Sto10g0177 879 Gene3D - 15 308 IPR011989 -
Sto10g0177 879 SUPERFAMILY Clathrin adaptor appendage domain 609 763 IPR013041 -
Sto10g0177 879 MobiDBLite consensus disorder prediction 570 612 - -
Sto10g0177 879 PANTHER COATOMER SUBUNIT GAMMA 6 879 IPR017106 -
Sto10g0177 879 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 762 876 IPR032154 -
Sto10g0177 879 Pfam Coatomer gamma subunit appendage platform subdomain 614 759 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Sto10g0177 879 SUPERFAMILY ARM repeat 21 572 IPR016024 -
Sto10g0177 879 PIRSF Gamma-COP 2 877 IPR017106 -
Sto10g0177 879 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 764 876 IPR009028 GO:0006886|GO:0016192|GO:0030117
Sto10g0177 879 PANTHER COATOMER SUBUNIT GAMMA 6 879 - -
Sto10g0177 879 Gene3D Coatomer, gamma subunit, appendage domain 608 760 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Sto10g0177 879 Pfam Adaptin N terminal region 21 532 IPR002553 GO:0006886|GO:0016192|GO:0030117
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0177 Sto-Chr10 1452175 1458641 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0177 K17267 - gmx:100789362 1617.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0177 10 1452175 1458641 Sto10g0177 10 1452175 1458641 ECH