Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0175 ATGGAGGCGAAGCTGATAGAGAGGTTAGAATCAGCTGTGACGCGCCTAGAATCGCTATCGTCCGGGTTCCACTCAGGTGGTTTGCCGAGAGGCGGTGGAGACGCGGCATTTTCCGGCATCGATGCGGTTGCGGATCCTTCGATTGTTGCCTTCGACGATCTCATGACGCAATATGTTGGCGCTGTTTTAAGGCCTGCGGAGAAGATCGGAGGACTGGTCTTGGAGGTGACAAAGGTTTTGCAAGAAGCTTTTGCTGTTCAGAAAGAGCTTTTGATCATGATCAAGCACACTCAGAAACCTGACCCTGCTGGAgtgtttgaatttttgaaaCCGTTGAATGAAGTGATGTCGAAGGCTACTGCAATGACAGAAGGAAAGAGATCTGATTTTTTTAACCATTTGAAGGCTGCTGTTGACAGTCTCTCAGCTCTAGCATGGATTGCATTTACGGGGAAGGGTTGTGGTATGAGCATGCCTGTTGCACACGTGGAGGAAAGTTGGCAAATGGCTGAGTTTTACAGTAACAAGGTATTCCTCAATCCTCATGCTGTCATTCATGCCAGAAGGCTGGTGCTTGTAGAGTATAGAAACAAAGACTCGAATCATGTTGAGTGGATCAAAGCTCTTAAAGAGCTATATCTACCTGGTTTGAGGGATTACATTAAGAATTTTTATCCTTTAGGCCCAGTATGGAATCCAACGGGAAAACCTGTTGCTCAATCAAAAGCTCCTACAACTAGTGCGCCTGCTCCCCCAGTTCCTCCACCTGCTTTTCTCATTAGTTCAGAACCCCCTCAGGCTTCATCATCTAAGCCAAAAGATGGGATGTCTGCTGTTTTTCAACAAATCAACACAGGGAATGTCACTGCGGGTTTGAGAAAGGTTACGGATGACATGAAGACAAAGAATCGCACAGATAGAACTGGAATTGTAGGTGGTGGCACTAGTGAAAAAGAAAGTCGTGCAGGTTCACATGCAACTTCTAAAGCAGGACCTCCTAAGTTCGAACTTCAAATGGGCCGCAAGTGGGTTGTTGAAAATCAAATTGGGAAGAAAGACTTGGTGATTGGTGATTGTGATGCAAAACAGTCTGTTTACATTTATGGATGCAAAGATTCTGTTTTGCAGGTTCAAGGCAAGATCAACAATATTACTGTTGACAAATGCACAAAGATGGGAGTTCTATTTAAGGATGTTGTTGCAGCATGTGAGATGGTAAATTGTAATGGGGTTGAGGTGCAGTGTCAGGGTTCGGCACCAACAATTTCCGTGGACAACACTTCTGGCTGCCAGATTTATCTGAGCAAAGAGTCTTTAGAAACATCCATATCAACAGCCAAGTCAAGTGAGATCAATATTATGGTACCTGGTGCTGAACCTGATGGTGATTGGCTTCCCACTCTGGAGCTTAGATTGATTGGTAATTTGGACTTCCAAATTGTTTTCACTTCATCACCTTCCATAGCCTCGCAATCATTTATCGGTGTGAACTACGGTCAGGTCGCCGACAATCTTCCGCCGCCGGAAGCCACGGCGAAGCTCCTCCAGAGCACCACCATCGGTAAAGTCCGTCTCTACGGCGCCGATCCGGCGATTATCAAAGCCCTTGCTAACTCCGGCATCGGAATCGTCATCGGCGCCGCCAACGGCGACATTCCGAACCTCGCCTCGGATCCGAACTCGGCGACTCAGTGGATCAATGCGAATGTGCTTCCCTTCTACCCGGCCAGTAACATCACTCTCATTACCGTCGGTAACGAGGTGGTTACCTCCGGCGACCAGGGCCTGATCTCGCAGCTCCTTCCGGCGATGCAAAATGTCCAAAATGCCCTTAACGCCGCCTCGCTGGGCGGTAAAATCAAGGTGTCCACGGTGCACTCGATGGCGTTGTTGACCCAATCGGATCCACCGTCGTCCGGGTCGTTCGACCCGAAGCTCCGAGACACGCTGAAGCAGATGCTGGCGTTTCAGAAGGATAACGGATCGCCGTTGGCCATCAACCCGTACCCGTTTTTCGCGTACCAGAGTGATCCGAGACCCGAAACGCTTAAATTCTGCCTCTTTCAACCGAACTCGGGTCGGGTCGATTCGGGTAACGGGAAGCTTTACACCAACATGTTCGATGCTCAGGTTGATGCTGTACATTCTGCATTGAGTAGCATGGGGTTCCAAGACATAGGGATAGTGGTTGCCGAGACAGGATGGCCGACACATGGGGATAGCAATGAAGTAGGACCGAGTGTTGACAATGCAAAGGCATACAATGGAAACCTCATCACACACCTTAGGTCACTTGTTGGCACCCCTTTGATGCCCGGCAAATCTGTTGACACTTACATCTTCGCACTCTATGATGAGGATTTGAAGCCCGGTCCGACTTCTGAGCGTTCATTCGGGCTTTTCAAAACCGATCTCACCGCGACATATGATGTTGGCCTAGACAAGACTAGCCAGAAAACTCCCGTCACTCCCGTTACTCCGGCACCTACAACTGCACAGGGATGGTGTGTTCCGAAATCCGGTGCGTCGGATGCACAATTGCAGGCAAACATAGATTATGCGTGCAGCCATGGCATAGACTGTGGACCAATTCAGGCAGGAGGTGCTTGTTTTGAACCAAACACTGTGGCATCACATGCTGCTTATGCCATGAAtctttactaccaaacacaaggCAAAAATCCTTGGAACTGTGATTTCTCTCAAACAGCAACTCTTACATCCCAAAATCCAAgTTACAATGCTTGCACTTATCCTGGTGGGAGTacctga 2772 0.4798 MEAKLIERLESAVTRLESLSSGFHSGGLPRGGGDAAFSGIDAVADPSIVAFDDLMTQYVGAVLRPAEKIGGLVLEVTKVLQEAFAVQKELLIMIKHTQKPDPAGVFEFLKPLNEVMSKATAMTEGKRSDFFNHLKAAVDSLSALAWIAFTGKGCGMSMPVAHVEESWQMAEFYSNKVFLNPHAVIHARRLVLVEYRNKDSNHVEWIKALKELYLPGLRDYIKNFYPLGPVWNPTGKPVAQSKAPTTSAPAPPVPPPAFLISSEPPQASSSKPKDGMSAVFQQINTGNVTAGLRKVTDDMKTKNRTDRTGIVGGGTSEKESRAGSHATSKAGPPKFELQMGRKWVVENQIGKKDLVIGDCDAKQSVYIYGCKDSVLQVQGKINNITVDKCTKMGVLFKDVVAACEMVNCNGVEVQCQGSAPTISVDNTSGCQIYLSKESLETSISTAKSSEINIMVPGAEPDGDWLPTLELRLIGNLDFQIVFTSSPSIASQSFIGVNYGQVADNLPPPEATAKLLQSTTIGKVRLYGADPAIIKALANSGIGIVIGAANGDIPNLASDPNSATQWINANVLPFYPASNITLITVGNEVVTSGDQGLISQLLPAMQNVQNALNAASLGGKIKVSTVHSMALLTQSDPPSSGSFDPKLRDTLKQMLAFQKDNGSPLAINPYPFFAYQSDPRPETLKFCLFQPNSGRVDSGNGKLYTNMFDAQVDAVHSALSSMGFQDIGIVVAETGWPTHGDSNEVGPSVDNAKAYNGNLITHLRSLVGTPLMPGKSVDTYIFALYDEDLKPGPTSERSFGLFKTDLTATYDVGLDKTSQKTPVTPVTPAPTTAQGWCVPKSGASDAQLQANIDYACSHGIDCGPIQAGGACFEPNTVASHAAYAMNLYYQTQGKNPWNCDFSQTATLTSQNPSYNACTYPGGST 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0175 923 Pfam X8 domain 835 905 IPR012946 -
Sto10g0175 923 ProSitePatterns Glycosyl hydrolases family 17 signature. 726 739 IPR000490 GO:0004553|GO:0005975
Sto10g0175 923 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 332 464 IPR036223 -
Sto10g0175 923 SMART X8_cls 834 918 IPR012946 -
Sto10g0175 923 Gene3D - 331 484 IPR016098 -
Sto10g0175 923 Gene3D Glycosidases 493 820 - -
Sto10g0175 923 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 486 915 IPR044965 GO:0004553|GO:0005975
Sto10g0175 923 Pfam Adenylate cyclase associated (CAP) C terminal 332 464 IPR013912 GO:0003779|GO:0007010
Sto10g0175 923 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Sto10g0175 923 MobiDBLite consensus disorder prediction 247 261 - -
Sto10g0175 923 Gene3D - 47 236 IPR036222 -
Sto10g0175 923 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 47 256 IPR036222 -
Sto10g0175 923 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 7 486 915 - -
Sto10g0175 923 Pfam Glycosyl hydrolases family 17 494 811 IPR000490 GO:0004553|GO:0005975
Sto10g0175 923 MobiDBLite consensus disorder prediction 301 333 - -
Sto10g0175 923 SMART carp 408 445 IPR006599 -
Sto10g0175 923 SMART carp 370 407 IPR006599 -
Sto10g0175 923 Gene3D - 830 918 - -
Sto10g0175 923 SUPERFAMILY (Trans)glycosidases 494 812 IPR017853 -
Sto10g0175 923 ProSiteProfiles C-CAP/cofactor C-like domain profile. 332 470 IPR017901 -
Sto10g0175 923 MobiDBLite consensus disorder prediction 236 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0175 Sto-Chr10 1433642 1444386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0175 490 919 Miscellaneous Gene Families AT2G16230 68.605 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0175 - - gmx:100778892 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0175 10 1433642 1444386 Sto10g0175 10 1433642 1444386 ECH