Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0166 ATGCAGGAAATCGCACACGAAGCGAAGCAGAAATCGGCAATCCTCAACAACAATAAAAGCAGCGATGAGAAGCAATTTCAGGTCGATACTGGTTCTGCCCTCCAGCAATTTCTGGATCGCATACCTATTAGTTCCATATCCGGCTTCCAAAGTTCATTCGGTTGGGAATTGAAAGCTGGGGATAGTGTGAAGGATGCAATTCATATGCTGTATGATAAGGATGTGTTTGGAGCACCCATTGCTGATGTGTTTGACCCCAATTCAACCAGCATGAAATTTTCATATCGCTATATTGGTTTCATTGATTTCCCCAGCATGGTTCTTTGGTGTCTTGagGAGTATGAAAATATCAGAAAGAATTCCGCAGACAAAGGTCGTGAAGAGAAAAGAAACTCTGGTTTTTTCTCCACCATGGACCAGATTCCTCAGATTGGACAAACCAAGGTGAGTGAGTTAGTAAAGCTATTCCTCTGGGAACCATTTTTCCCTATCCGCATGGATGACTCGCTTCTTCATGCACTGCTACTTCTTTCTAAGCATCGGCTGCATGTTTTGCCCGTTGTACAGCAGTCGGATCCCCAAGTCATTGGTCTAGTTACGCAGAATGCTTTAGGTCAATTGCTTCTTCAATCAACCGGACTAGAGTGGTTCGATAGCATTGCAGACAAGGCCCTGTCAAATCTCGAAATTGAAAACCAAGAACAAGCTAGTTATGTATTTGGGAACCAAACTGTTGCTGATGCTTTACATTTGCTGTGGAAGAAACGAACTTGTGCAGTAGCAGTTCTAGATCCACAGAGTAAGAAGCTCATTGGTAGTGTGAGGTACAGAGATGTCTATCATCTTGTAGAAAATGATGACCTCTTCAGGAACAGAAAGACATTAACTGTTGGAGAATTCATTCACTCAGAGACTGATCCACCCATTGAATTAGACAATGAAGCTTCTCTAATAGCAAGAAGTCTGCACCTGAAGAAAAGCTTCATGCCCAGGATGGACTCTCCATTGACTTGCAAGAAAAATGACACACTGAAGCAATTGATGCAGAATATGACAGAGAGGAATAGCAGGTTCAGCTTTCTGATCGATGACAATGAAGGAGTCATAGGATTGATCACAATGAGACACATTATTCTGCAGTTTGCTCCCCCATGTGTGAGTTCTAGTATTAATGGAGGTGGGTTTTTTGAATTAGCTTTGGAACAGAGTGGATGTCAAGTACGAGATGGAACTCTAGTTTGTAACCATTGA 1251 0.4229 MQEIAHEAKQKSAILNNNKSSDEKQFQVDTGSALQQFLDRIPISSISGFQSSFGWELKAGDSVKDAIHMLYDKDVFGAPIADVFDPNSTSMKFSYRYIGFIDFPSMVLWCLEEYENIRKNSADKGREEKRNSGFFSTMDQIPQIGQTKVSELVKLFLWEPFFPIRMDDSLLHALLLLSKHRLHVLPVVQQSDPQVIGLVTQNALGQLLLQSTGLEWFDSIADKALSNLEIENQEQASYVFGNQTVADALHLLWKKRTCAVAVLDPQSKKLIGSVRYRDVYHLVENDDLFRNRKTLTVGEFIHSETDPPIELDNEASLIARSLHLKKSFMPRMDSPLTCKKNDTLKQLMQNMTERNSRFSFLIDDNEGVIGLITMRHIILQFAPPCVSSSINGGGFFELALEQSGCQVRDGTLVCNH 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0166 416 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 9 416 - -
Sto10g0166 416 ProSiteProfiles CBS domain profile. 329 388 IPR000644 -
Sto10g0166 416 ProSiteProfiles CBS domain profile. 157 214 IPR000644 -
Sto10g0166 416 CDD CBS_pair_SF 238 378 - -
Sto10g0166 416 Pfam CBS domain 157 201 IPR000644 -
Sto10g0166 416 Pfam CBS domain 334 378 IPR000644 -
Sto10g0166 416 Gene3D - 218 382 IPR046342 -
Sto10g0166 416 PANTHER OS01G0633400 PROTEIN 9 416 - -
Sto10g0166 416 SUPERFAMILY CBS-domain pair 240 380 IPR046342 -
Sto10g0166 416 SUPERFAMILY CBS-domain pair 57 206 IPR046342 -
Sto10g0166 416 Gene3D - 55 212 IPR046342 -
Sto10g0166 416 SMART cbs_1 160 209 IPR000644 -
Sto10g0166 416 SMART cbs_1 334 382 IPR000644 -
Sto10g0166 416 SMART cbs_1 235 284 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0166 Sto-Chr10 1347133 1349577 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0166 - - gmx:100819351 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0166 10 1347133 1349577 Sto10g0166 10 1347133 1349577 ECH