Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0165 ATGGGAAGCCTCAGGGCCTCAGGCCTCATAGGATCCACAAACATAGATATGATGTGTTTGGTGGAATTTGAGCACTTCCATTGTGTGCTTGAGCTCTCTGCTTCGGCAATGGCTTCTTCCTGTGTGACCTTGAAAGCCAATACCCATTTACAAAACGCAAGAAACTGTGATTTCTTTCGCCACCAGGAAAATGGGTTTCTAGGGGAAAGAATCAGGACCTTGAATTGTAGTAGTAATCCCTATGCGAATCATTTGGCTACTACAGGTTTGAGAAACGAGAAGAGGATCAAGAAGGTcaaaaacggcgtcgtttctGCTGTTCTGACGTCAAATAATGCCACCACAGAATCTCTGACTCAGACCTTGCAGATGCCTTCGTTTCTGAGACGAAGGGCTGACCCCAAAACTGTAATTTCCATCATATTGGGAGGAGGACCTGGAATTCAACTCTTTCCTCTTACCAAACGAGCTGCAACACCCGCTGTCCCTGTTGGTGGATGCTACAGACTTATAGACATCCCTATGAGTAACTGTATCAACAGTGgcattaacaaaatatttgtaCTCACTCAATTCAACTCTGCTTCCTTGAACCGCCACATCTCTCGCACCTACTTCGGAAACGGTATCAACTTTGGGGATGGATTTGTGGAGGTTCTGGCGGCTACTCAAACACCAGGAGAAGCAGGGAAAAAATGGTTCCAAGGGACTGCAGATGCTGTGAGACAATTTACATGGGTATTTGAGGATGCCAAGAACACAAATGTTGAGAATGTACTGATCTTGGCTGGAGATCATCTGTACCGAATGGATTACATGGACCTCCTGCAGAGTCATATCGACAGAAATGCTGATATTACAATTTCATGCGCGGCAACGGGTGACAGCCGTGCATCAGATTATGGATTGGTCAAGGTAGATAGCAGAGGCCGGATCATCCAATTTTCGGAGAAACCAAAGGGTGCTGATCTGAAAGCAATGCAAGTAGATACCTCTTCTATCGGGTTGTCGCACCAAGATGCATTAAAGTCTCCATATATTGCATCCATGGGGGTTTATGTATTCAAGACAGATGTTTTACTCAAGCTTCTGAAATGGAGATATCCTACATCCAATGACTTTGGGTCTGAAATCATTCCTGCAGCTGTGAGGGAACATGATGTCCAAGCATATTTTTTCAGAGACTACTGGGAAGACattggaacaataaagtccttTTACCATGCTAACCTTGCTCTTACTGAAGAGAATCCAAAGTTCAAATTTTATGACCAGAAAACACCCATTTTCACGTCACCCCGATTCCTGCCACCAACAAAGATCGATAAGTGTCGGATTGTGGATGCAATTATCTCCCATGGATGTTTCCTGAGAGAATGTACGGTCCAGCATTCCATTGTGGGTGAACGGTCTCGTTTGGATTATGGTGTTGAACTTCAgGACACTGTGATGATGGGAGCAGACTATTACCAAACTGAATCTGAAATTGCTTCTCTGCTAGCAGAAGGAAAGGTCCCAATAGGGATTGGAGGGAACACCAAAATTAGGAACTGTATTATTGACAAGAATGCAAAGATTGGGAAAGATGTCATCATCATGAACAAAGATGGTGTGGAAGAAGCAGATAGGCCAGAAGATGGATTTTACATACGATCAGGAATCACAGTCATCTTGGAGAAGGCAACTATAGAAGATGGCACTGTCATATAA 1710 0.4269 MGSLRASGLIGSTNIDMMCLVEFEHFHCVLELSASAMASSCVTLKANTHLQNARNCDFFRHQENGFLGERIRTLNCSSNPYANHLATTGLRNEKRIKKVKNGVVSAVLTSNNATTESLTQTLQMPSFLRRRADPKTVISIILGGGPGIQLFPLTKRAATPAVPVGGCYRLIDIPMSNCINSGINKIFVLTQFNSASLNRHISRTYFGNGINFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFTWVFEDAKNTNVENVLILAGDHLYRMDYMDLLQSHIDRNADITISCAATGDSRASDYGLVKVDSRGRIIQFSEKPKGADLKAMQVDTSSIGLSHQDALKSPYIASMGVYVFKTDVLLKLLKWRYPTSNDFGSEIIPAAVREHDVQAYFFRDYWEDIGTIKSFYHANLALTEENPKFKFYDQKTPIFTSPRFLPPTKIDKCRIVDAIISHGCFLRECTVQHSIVGERSRLDYGVELQDTVMMGADYYQTESEIASLLAEGKVPIGIGGNTKIRNCIIDKNAKIGKDVIIMNKDGVEEADRPEDGFYIRSGITVILEKATIEDGTVI 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0165 569 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 123 434 IPR029044 -
Sto10g0165 569 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 37 569 - -
Sto10g0165 569 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 137 533 IPR011831 GO:0005978|GO:0008878
Sto10g0165 569 Pfam Nucleotidyl transferase 139 415 IPR005835 GO:0009058|GO:0016779
Sto10g0165 569 SUPERFAMILY Nucleotide-diphospho-sugar transferases 136 530 IPR029044 -
Sto10g0165 569 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 348 358 IPR005836 GO:0005978|GO:0008878
Sto10g0165 569 Gene3D Hexapeptide repeat proteins 435 569 - -
Sto10g0165 569 SUPERFAMILY Trimeric LpxA-like enzymes 431 569 IPR011004 -
Sto10g0165 569 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 233 241 IPR005836 GO:0005978|GO:0008878
Sto10g0165 569 CDD ADP_Glucose_PP 140 400 - -
Sto10g0165 569 CDD LbH_G1P_AT_C 437 563 - -
Sto10g0165 569 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 37 569 IPR011831 GO:0005978|GO:0008878
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0165 Sto-Chr10 1337131 1344658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0165 K00975 - gmx:100808791 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0165 10 1337131 1344658 Sto10g0165 10 1337131 1344658 ECH