Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0152 ATGGCAACAGAGGAAGTGCTTCACATGAATGATGGTGTGGGAGAAACTAGTTATGCAAACAATTCCTTGCTTCAGAGAAAAGTATCATTAAAAGTGAAGCCAATCCTGAAAGAGCACATCACAAAAGTATACACAAACATTGATGTTTCAGATTGTTTGAAAGTTGCAGATCTGGGGTGTTCTTCAGGACCTAACACATTGTTGATAGCATCTGAGATTATGGGAATGATTGATGAGATAAGCTtgaggttgaagaagaagaagacacctGCATTTCAGATATTTCTCAATGATCTTCCTTCAAATGATTTCAACACAATCTTCAACTCTCTTCCTGATTTTTACAAGAATCTACAACATGAAAAGGGACACAATTTTGGGCCTAATTGTTTCATTCTTGGTGCTCCTGGGAGTTTCTATGGGAGGCTGTTTCCGGAAAATTCCATCCACTTCTTTCATTCCTCTTACAGTCTCCATTGGCTCTCTCAGGTCCCAAAGGGTTTGAGTGGTAGAAATTTGAATGAAGGGAATATTTATATAGCAAACACAAGCTGTGAAGCAGTGTGGAAAGCATATTTTGAGCAATTTGAAGATGATTTCAAAGTGTTTCTCAAACATCGTTCAGTGGAATTAGTAAAAGGTGGTGGAATGGTCCTTACTTTTATAGGCAGACCTCAGGATCAACAACCCCTTACTATACATAGTTTAATTGGGATCACACTCCATGACATGGTCCTAGAGGTGCCGAAGGGTTTGAGTAGTAATGGAGGTGAAGCGTTGAACAAAGATGAcatttatatatcaaataaaagcCCTGGGGGTGTGTGGAAAGCATACGTTGAGCAATTTGAACAAGATTTCTTACACTTTCTGAGGCATCGTTCTGTGGAATTAGTAAATGGTGGCTCTATGCTTCTCACTCTTCTTGGCAGACTTGAAAATCAAGACCCAACAACTACCTTTAATATAATTGGAATGGCACTTCATGACTTGATCTTACagAACAAAATTGAGGAGGCGAAGCTGGAGTGTTTTGACATTCCCTATTATGGGCCTACTGAAAAGGAAGTTAGGAAGATAATTGAAAGAGAAGGATCGTTCAGAGTTGAAAGAATTGAGATAATCAAATTGGGAACTGGGAAATCAAGCCTTGTTGCTGCAATGGCCAATTATCTCAACTTTGATGTATATGACTTGGAGCTCACTGATCTTATGCGTAATTCTGAGCTCAGAAAGTTGCTCATTTCAACTGGGAATCGTTCTATACTTGTGGTCGAAGATATTGATTGCTCCATTGAACTGCAAAATCTTGATTTTGAAAATGctaaaaatacaataataagTACTTCAACTTCAAGAGTATGGATAATATGTTCTTATCAATGCCTGCTTAAAATTGTTGGATAA 1407 0.3674 MATEEVLHMNDGVGETSYANNSLLQRKVSLKVKPILKEHITKVYTNIDVSDCLKVADLGCSSGPNTLLIASEIMGMIDEISLRLKKKKTPAFQIFLNDLPSNDFNTIFNSLPDFYKNLQHEKGHNFGPNCFILGAPGSFYGRLFPENSIHFFHSSYSLHWLSQVPKGLSGRNLNEGNIYIANTSCEAVWKAYFEQFEDDFKVFLKHRSVELVKGGGMVLTFIGRPQDQQPLTIHSLIGITLHDMVLEVPKGLSSNGGEALNKDDIYISNKSPGGVWKAYVEQFEQDFLHFLRHRSVELVNGGSMLLTLLGRLENQDPTTTFNIIGMALHDLILQNKIEEAKLECFDIPYYGPTEKEVRKIIEREGSFRVERIEIIKLGTGKSSLVAAMANYLNFDVYDLELTDLMRNSELRKLLISTGNRSILVVEDIDCSIELQNLDFENAKNTIISTSTSRVWIICSYQCLLKIVG 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0152 468 PANTHER JASMONATE O-METHYLTRANSFERASE 247 378 - -
Sto10g0152 468 PANTHER JASMONATE O-METHYLTRANSFERASE 6 246 - -
Sto10g0152 468 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 247 378 IPR005299 GO:0008168
Sto10g0152 468 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 6 246 IPR005299 GO:0008168
Sto10g0152 468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 378 430 IPR027417 -
Sto10g0152 468 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 247 377 IPR029063 -
Sto10g0152 468 Pfam SAM dependent carboxyl methyltransferase 39 245 IPR005299 GO:0008168
Sto10g0152 468 Pfam SAM dependent carboxyl methyltransferase 247 380 IPR005299 GO:0008168
Sto10g0152 468 Gene3D Vaccinia Virus protein VP39 248 392 IPR029063 -
Sto10g0152 468 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 247 IPR029063 -
Sto10g0152 468 Gene3D Vaccinia Virus protein VP39 27 246 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0152 Sto-Chr10 1216629 1224494 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0152 K21483 - zju:107405871 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0152 10 1216629 1224494 Sto10g0152 10 1216629 1224494 ECH