Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0147 ATGGTGAAGGACACTTTGTACTACGATACATTAGGTGTCGAAGTTGATGCATCTCCTGCAGATATCAAGAAGGCCTATTATGTCAAGGATGCTTCTAAATTTAACTTAACTCAATTTGGTGATTCATATTTGGGAATTTATCAATTAGACAAGTATAGAAATCTGGCTTCGGtttttgctACTTATGAATCTGTCATTGCATACTCCATGCCTTCATTGTGGCTTCCTAACACCGCCAAATGTGCACAAAAGTTTCAATTATATGTTACATATCATTTGAGgaacaaaatgataattttctttATAAGTTTAAAGTTTGCGGCAAGGATAGTTCACCCAGATAAAAATCCTGGAGATCCTAATGCTGCAGAGAATTTTCAGAAACTTGGTGAGGCTTACCAGGTTTTAAGTGATCCTGTAAAGCGTGAAGCATATGATAAGAATGGAAAAGCAGGAGTACCACCAGATTCCATGTTAGACCCTACAGCTGTATTTGGGATGCTTTTTGGAAGTGAATGTTTTGAAGAATATATTGGACAGCTTGCATTGGCGTCTCTAGCATCTATAGAAGTTGAGGAAGACCTACAGGAGGCTGAGCGGAAgcaaaaaattcaagaaaaaataaaaGCATGGCAAAAAGATAGGGAACAAAAGCTTACAACAAATCTTAAAGTTCACCTTCAACCATTTGTTGATGGTCGAACAGAAGAATTTACAAAATGGGCTAATTCAGAAGCAAGCCATCTTTCACAAGCTGCATTTGGAGAGGCCATGCTACATACAATTGGCTATATTTACACACGAAGAGCTGCAAAAGAACTTGGAAAGGGTATACGATATATGAGAGTTCCCTTTTTAGCAGAGTGGGTACGAGACAAAGGACACCAGATTAAGTCACAGGTGATGGCTGCATCAGGTGCTGTGAACTTAATTCAAATACAAGAAGAGTTGAAGAGGCTAAATCAAGgagaaaacaaagaagaaaacatGGTAAAAGCTATTGAAGCTAAGAAGGATGCCATGATTAATTCCCTTTGGCAGATCAATGTAGTCGACATTGAATCCACTCTCTCACGTGTCTGCCAAGCTGTTCTTAGAGATTCTAGTGCCACTAAAGATGTTTTGAGGCTAAGGGCTAAAGGCTTAAAAAAGTTGGGAACTATCTTCCAAGGTGCTAAGGCTGCTTACAAAAGAGAAAACAGTCTACGCAGTGAAACTGACCCAAAGGAAAATACTGACGCAAAAAATGCTCGTTCTTCATCATCATAG 1269 0.3735 MVKDTLYYDTLGVEVDASPADIKKAYYVKDASKFNLTQFGDSYLGIYQLDKYRNLASVFATYESVIAYSMPSLWLPNTAKCAQKFQLYVTYHLRNKMIIFFISLKFAARIVHPDKNPGDPNAAENFQKLGEAYQVLSDPVKREAYDKNGKAGVPPDSMLDPTAVFGMLFGSECFEEYIGQLALASLASIEVEEDLQEAERKQKIQEKIKAWQKDREQKLTTNLKVHLQPFVDGRTEEFTKWANSEASHLSQAAFGEAMLHTIGYIYTRRAAKELGKGIRYMRVPFLAEWVRDKGHQIKSQVMAASGAVNLIQIQEELKRLNQGENKEENMVKAIEAKKDAMINSLWQINVVDIESTLSRVCQAVLRDSSATKDVLRLRAKGLKKLGTIFQGAKAAYKRENSLRSETDPKENTDAKNARSSSS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0147 422 SMART dnaj_3 94 141 IPR001623 -
Sto10g0147 422 Coils Coil 310 337 - -
Sto10g0147 422 MobiDBLite consensus disorder prediction 398 414 - -
Sto10g0147 422 Pfam DnaJ domain 108 146 IPR001623 -
Sto10g0147 422 ProSiteProfiles dnaJ domain profile. 6 149 IPR001623 -
Sto10g0147 422 MobiDBLite consensus disorder prediction 397 422 - -
Sto10g0147 422 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 107 406 - -
Sto10g0147 422 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 1 30 - -
Sto10g0147 422 ProSitePatterns Nt-dnaJ domain signature. 126 145 IPR018253 -
Sto10g0147 422 Gene3D DnaJ domain 2 158 IPR036869 -
Sto10g0147 422 SUPERFAMILY Chaperone J-domain 3 27 IPR036869 -
Sto10g0147 422 PRINTS DnaJ domain signature 8 26 IPR001623 -
Sto10g0147 422 PRINTS DnaJ domain signature 121 141 IPR001623 -
Sto10g0147 422 PRINTS DnaJ domain signature 141 160 IPR001623 -
Sto10g0147 422 PANTHER BNAA01G05380D PROTEIN 1 30 - -
Sto10g0147 422 PANTHER BNAA01G05380D PROTEIN 107 406 - -
Sto10g0147 422 SUPERFAMILY Chaperone J-domain 108 177 IPR036869 -
Sto10g0147 422 Pfam X-domain of DnaJ-containing 212 399 IPR026894 -
Sto10g0147 422 Coils Coil 181 201 - -
Sto10g0147 422 CDD DnaJ 108 138 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0147 Sto-Chr10 1159423 1164894 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0147 108 147 Miscellaneous Gene Families AT1G16680 62.500 4.00e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0147 - - gmx:100787075 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0147 10 1159423 1164894 Sto10g0147 10 1159423 1164894 ECH