Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0145 ATGGGTGCTGCTTGTTGTGTTGCTtccaaagaaaaagataaaaccaCACAAAGTGGATCGCCTAGTGAAATTTTACATCGCAACATTCGCTGCTCTCCAACATGGAGCTTTCGGTGGGATCATCGAAGGCGTGTAGCTGGTGAAGATACTTCTACACATTGGCTTTCTGATGGTATTAGCCAGAATGATGGAACAGAAGACAAAACTGATTCAGCAAATAAATCAGAGGATGGAATCCAATTACAAAATAATCAAAGGCATGGAGAGCAAAAGTCCCCAATTTGTGAAGGAACTGCTGGACATGCAAGGACTTACGCTCCAGATACGAAAATAATGGAGAATGAGAAAGACAGTGGATGGAAGAGGATAAAATCTGTCTATCCAGATATGTATTTAGTCGTATTTTCCAAGACAGAAGATCAATCTAATTCAAGGAATGTCTCAATGGATGTGAGTATGGAGCAGGGTAAGGCTTCAGAAGAATCACCAATAGTGTCTTGTTCACACCCCTCAAAACCATCATTTCCAATGCCTTCGACTTCCTTTCAAGTATCTCCAATTTCATCCCAAAGTCACTTTCCTCCAGCCAGCTCAACCCTGCCAAGGTGTCCCTGCCATTCCCCAGGAAACCAATTATTGCAGCAAGTTTCTCCTGGACGAATCCCAGGGCTCAAGTCACCAAGCAGCTTATCTGCTTCAGAAGAAAGGTCAGTGTTACCTTCATGGGGCAATGAATCAGGTAGGTTCTCCCGTGCTGGTTCTTCTGATGGTTGGTCTATACCTGGCTTTTCTGAGCTGATGGGCACTTCCTATGGAGGAAGATGGTCATTTGATAGTGAATCCTTCTGTTTTGATGATGAAAAGTTACCTACATCCAGTAGTCAGATTTCAAATTCTCCGGTAGATCTGCATACATGTGGTGTTTGCTCAAAGCTCTTAACTGAGAGGTCTTCTTGGAGCACCCAAAAGATAATTGCAAGTAATGAACTCTCTGTAGTAGCTGTTCTTATCTGTGGACATGTTTATCATGCTGAATGTTTGGAGAGTTTGACACCTGAAATAAACAAGTACGATCCAACTTGCCCAGTTTGCACTTTCGGTGAGAAACAAACTCTTAAGATGTCTGAAAAAGCTCTGAACGCTAAAATGGATTTGAAGGCTAAAAACAAGAAGTCAATGAACAGGGTTGTGGATAGTGGTACTGATGATGATTCTTGTGTGTTTGATGACCTCAAAGGTAGAGGGAACCAAGGTAAAGGTTTGCATTTCAGATCCAGTGGGAGAAACACCTTTGGGAAACCCTTTCTTAGGCACTTCTCATTTGGCTCAAGGAGTTCCAAAACCAAAAGCTTTTCTAATCACCCTGCACGAAAAAAGGGCTTCTTTCGGGCAAAATCTAACAAGGATTAA 1410 0.4184 MGAACCVASKEKDKTTQSGSPSEILHRNIRCSPTWSFRWDHRRRVAGEDTSTHWLSDGISQNDGTEDKTDSANKSEDGIQLQNNQRHGEQKSPICEGTAGHARTYAPDTKIMENEKDSGWKRIKSVYPDMYLVVFSKTEDQSNSRNVSMDVSMEQGKASEESPIVSCSHPSKPSFPMPSTSFQVSPISSQSHFPPASSTLPRCPCHSPGNQLLQQVSPGRIPGLKSPSSLSASEERSVLPSWGNESGRFSRAGSSDGWSIPGFSELMGTSYGGRWSFDSESFCFDDEKLPTSSSQISNSPVDLHTCGVCSKLLTERSSWSTQKIIASNELSVVAVLICGHVYHAECLESLTPEINKYDPTCPVCTFGEKQTLKMSEKALNAKMDLKAKNKKSMNRVVDSGTDDDSCVFDDLKGRGNQGKGLHFRSSGRNTFGKPFLRHFSFGSRSSKTKSFSNHPARKKGFFRAKSNKD 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0145 469 MobiDBLite consensus disorder prediction 48 101 - -
Sto10g0145 469 PANTHER EXPRESSED PROTEIN 1 462 - -
Sto10g0145 469 MobiDBLite consensus disorder prediction 1 25 - -
Sto10g0145 469 SMART ring_2 306 364 IPR001841 -
Sto10g0145 469 MobiDBLite consensus disorder prediction 75 91 - -
Sto10g0145 469 MobiDBLite consensus disorder prediction 157 253 - -
Sto10g0145 469 MobiDBLite consensus disorder prediction 444 469 - -
Sto10g0145 469 PANTHER BNAA09G43140D PROTEIN 1 462 - -
Sto10g0145 469 MobiDBLite consensus disorder prediction 451 469 - -
Sto10g0145 469 MobiDBLite consensus disorder prediction 11 25 - -
Sto10g0145 469 MobiDBLite consensus disorder prediction 157 254 - -
Sto10g0145 469 SUPERFAMILY RING/U-box 305 365 - -
Sto10g0145 469 ProSiteProfiles Zinc finger RING-type profile. 306 365 IPR001841 -
Sto10g0145 469 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 286 366 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0145 Sto-Chr10 1146248 1150800 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0145 - - gmx:100778123 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0145 10 1146248 1150800 Sto10g0145 10 1146248 1150800 ECH