Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0141 ATGGTGGGAGCTGGTGGAATTGGCTGCGAGCTGCTGAAAACTCTCGCTCTCTCGGGTTTCCAGGACATACATATTATTGACATGGACACTATAGAAGTCAGTAACCTGAACAGACAATTTTTATTTCGACAATCCCATGTTGGGCAATCCAAAGCTAAAGTTGCCAGGGATGCTGTCTTAAAATTTAGGCCCCACATAAACATTAAGTCTTACCATGCGAATGTCAAAGATCCTGATTTCAATGTGGAGTTCTTTAAGCAGTTTAATGTTGTTTTAAATGGACTGGACAATCTAGATGCACGACGGCATGTAAATCGTCTATGCTTGGCAGCTGATGTTCCATTGGTTGAAAGTGGAACTACTGGGTTCCTTGGAcagGTCACTGTACATGTTAAGGGAAGAACAGAATGCTATGAGTGTCAGCCTAAACCAGCTCCTAAGACCTATCCTGTTTGCACTATCACAAGTACCCCATCTAAGTTTGTTCACTGTATTGTGTGGGCAAAAGACCTACTTTTCACAAAGCTGTTTGGTGACAAGAATCAggaaaatgatttaaatataaGATCCAGTGATGGTGCCAGCTCATCAGAAAATGTAGTGGATGTATTTGAACGAAAGGAAGATGAAGACGTTGAACAGTATGGCAGGAGAATATTTGATCATGTATTCGGTTATAACATTGAATTAGCTTTGTCTAATGAAGAGACTTGGAAAAATCGCAATAGACCAAAGCCTATATATAGTAAGGATGTTCTGTCTGATGAACTGGCTCATCAGAATGGAAGTGTGAACAAAAACTTAGCGACTGATGATGGGTCGTTAGTTTCTGCCATGGCATCTTTGGGCATGAAGAATCCTCAGGATATCTGGAGTCTTTCAGAAAATTCTAGAAtcttttttgaaacactgagaCTATTTTTCACAAACAGGGGAAAGGAGATTGGAAACCTGAGTTTTGATAAAGATGATCAGCTAGCAGTAGAATTTGTTACCGCAGCCGCAAACATACGGGCTGCTTCATTTGGTATTCCTCTGCATAGCCTTTTTGAAGCTAAAGGTATTGCTGGTAATATTGTGCATGCTGTTGCAACAACCAATGCTATTATTGCTGGGCTGATTGTCATTGAAGCAATCAAGGTGCTGAAAAGTGACATAAAAAGTTATAGAATGACATATTGTTTGGAACATCCATCAAGAAAGATGCTGCTTATGCCAGTGGAACCATTTGAACCTAACAAGTCTTGTTATGTTTGTTCTGAGACACCTTTATCACTTGAGATAAACACTCATCATTCAAAGTTGAAAGATTTTGTGGAAAAGATTGTCAAGGCAAAGCTTGGGATGAACTTTCCTATTATTATGCAAGGATCTGCCCTTCTTTATGAGGTCGGTGACGATCTTGATGAAGACATGGTTGCAAATTATGCAGCCAACCTTGAAAAGGTTCTAGCCGAGCTTCCCTCCCCAGTAACAAGTGGTACAGTGCTTACAGTAGAGGATCTTCAACAGGAATTCACTTGCAACATCAACATCAAGCATAGGAAGGAGTTTGATGAAGAGAAAGAGCCTGATGGAATGCTTCTCTCAGGATGGACTCAACCTCCATCCGCACTAGAAAAGGAAGACAAGTCTATCAGCAATGGTGCAAGCACCTCTGATACACCAATAGCAGCTACGGAAGCTGAAAAGGACGAGATAGGTATAGTTTCCGCGGCAAAGAAACGAAGACTCTCAGACATTGTTGACTCTGAACTTTCAAATGCTGCGGATGAAGCAAGAAATCGCAACCAGTTACAAGTAATCGATGATGAAGACGATCTTGTCATGCTAGAAGGGAATTCCGACGGctacaaaaagaaaagattgCAATAG 1875 0.4 MVGAGGIGCELLKTLALSGFQDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPHINIKSYHANVKDPDFNVEFFKQFNVVLNGLDNLDARRHVNRLCLAADVPLVESGTTGFLGQVTVHVKGRTECYECQPKPAPKTYPVCTITSTPSKFVHCIVWAKDLLFTKLFGDKNQENDLNIRSSDGASSSENVVDVFERKEDEDVEQYGRRIFDHVFGYNIELALSNEETWKNRNRPKPIYSKDVLSDELAHQNGSVNKNLATDDGSLVSAMASLGMKNPQDIWSLSENSRIFFETLRLFFTNRGKEIGNLSFDKDDQLAVEFVTAAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAIIAGLIVIEAIKVLKSDIKSYRMTYCLEHPSRKMLLMPVEPFEPNKSCYVCSETPLSLEINTHHSKLKDFVEKIVKAKLGMNFPIIMQGSALLYEVGDDLDEDMVANYAANLEKVLAELPSPVTSGTVLTVEDLQQEFTCNINIKHRKEFDEEKEPDGMLLSGWTQPPSALEKEDKSISNGASTSDTPIAATEAEKDEIGIVSAAKKRRLSDIVDSELSNAADEARNRNQLQVIDDEDDLVMLEGNSDGYKKKRLQ 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0141 624 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 147 358 IPR023318 -
Sto10g0141 624 Gene3D - 1 92 IPR042449 -
Sto10g0141 624 Pfam ThiF family 1 417 IPR000594 -
Sto10g0141 624 PIRSF SUMO_E1B 1 605 IPR030661 GO:0016925|GO:0019948
Sto10g0141 624 MobiDBLite consensus disorder prediction 540 558 - -
Sto10g0141 624 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 1 540 IPR045886 -
Sto10g0141 624 Pfam Ubiquitin-activating enzyme, SCCH domain 313 353 IPR019572 -
Sto10g0141 624 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 1 476 IPR035985 GO:0008641
Sto10g0141 624 PANTHER SUMO-ACTIVATING ENZYME SUBUNIT 1 540 - -
Sto10g0141 624 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 426 518 IPR028077 -
Sto10g0141 624 CDD Uba2_SUMO 1 419 - -
Sto10g0141 624 MobiDBLite consensus disorder prediction 517 564 - -
Sto10g0141 624 Gene3D - 420 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0141 Sto-Chr10 1125525 1129302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0141 318 412 EF-hand Containing Proteins AT2G30110 35.000 7.11e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0141 K10685 - gmx:100779926 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0141 10 1125525 1129302 Sto10g0141 10 1125525 1129302 ECH