Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0123 ATGAAGAGATTCAAATTCGGTTACCTTGCTCTGTTTCTGGTGATCCAGTTCGAAATGCCGAGTTCAGGAGAGGCTCACGATTACGGAGACGCGTTATCGAAGGCGATCCTGTTCTTCGAGGGACAACGATCGGGGTTTCTGCCGGAGGATCAGAGGATGAGGTGGAGGGAGCATTCGGGGATGGGCGACGGGTGGATGTACGAGACGGACCTCACCGGCGGGTACTACGACGCCGGCGACAACGTGAAATTCGGATTTCCGATGGCGTTCACGACCACAATGCTGGCTTGGAGCGTCGTGGAATTCGGAGACGACATGCCTCCGACGGAGCTCCGGAATTCGCTTGCGGCTATTCGTTGGGGTACCGATTATTTGCTCAAGACTGTGTCTCAGCCTGATAGGATTTTCGTTcagGTGGGGGATCCAAGCATAGACCACAACTGTTGGGAGAGACCAGAAGACATGGACACAGCCAGGACAGTGTATGCCATTGACGCACCGAATCCGGCTTCGGATGTGGCCGGAGAAACCGCGGCGGCACTCGCAGCTTCATCGATTGCATTCCGGTCATGGGACCCGGGATACTCGGAGACATTGCTCCGAAATGCTATAAAGGCCTTTCAGTATGCTGATAACTACAGAGGAGCGTACACTGACAATGGTCATGTTAGGGATGGTGCATGTCCATATTATTGCAATTTTGATGGCTAtcagGATGAGTTGTTATGGGGAGCAGCATGGCTAAGAAGAGCAACGGAGGAGGATGATTTCTTGAACTACATTCAAGGAAATGCCAAAGCACTCGGTGCTCAAGATAATATCAATGAATTTGGTTGGGAAAACAAGCATGCTGGCCTCAATGTTCTTGTCTccaaggAAGTGATAGAAGGAAGCATGTACTCTCTAGAATCCTACAAGGCGTCAGCAGAGAGCTTCATGTGCAGCCTCATACCCGAATCACCAACTTCACAAGTCCAATACACTCCCGGGGGATTGATATACCGACCCGGTGGTAGCAATTTGCAGCATGCTACCTCCATCTCCTTCCTTCTCTTAGTCTACGCCAATTACCTCTCTCGTtcctcccaaaccctaacctgtGGTGGGGGTGGGACCCTCTCCAACCTCTCTCCTTCCGCCCTCCGACGAATCGCCAAGCGACAGGTGGACTACATCCTAGGGCACAACCCCAAGGGAATGTCCTACATGGTTGGATATAGTCACCACTTCCCTCAAAGGATCCACCATCGTGCCTCTTCTTTGCCCTCCATGAAGGACCATCCTAACTTCATTGCATGCAAGGAAGGCTCTCTTTACTTCAATTCttctaaccctaaccctaatgtTCTTGTGGGAGCCATTGTGGGAGGGCCTGAGGAGGACGACGAGTACGAGGATGATCGAGCCGATTTTAGGAAATCCGAGCCCACCACGTATATCAATGCTCCTTTTGTCGGGGTTTTAGCCTACTTTCTTGCTAATCCTgacctttaa 1494 0.4926 MKRFKFGYLALFLVIQFEMPSSGEAHDYGDALSKAILFFEGQRSGFLPEDQRMRWREHSGMGDGWMYETDLTGGYYDAGDNVKFGFPMAFTTTMLAWSVVEFGDDMPPTELRNSLAAIRWGTDYLLKTVSQPDRIFVQVGDPSIDHNCWERPEDMDTARTVYAIDAPNPASDVAGETAAALAASSIAFRSWDPGYSETLLRNAIKAFQYADNYRGAYTDNGHVRDGACPYYCNFDGYQDELLWGAAWLRRATEEDDFLNYIQGNAKALGAQDNINEFGWENKHAGLNVLVSKEVIEGSMYSLESYKASAESFMCSLIPESPTSQVQYTPGGLIYRPGGSNLQHATSISFLLLVYANYLSRSSQTLTCGGGGTLSNLSPSALRRIAKRQVDYILGHNPKGMSYMVGYSHHFPQRIHHRASSLPSMKDHPNFIACKEGSLYFNSSNPNPNVLVGAIVGGPEEDDEYEDDRADFRKSEPTTYINAPFVGVLAYFLANPDL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0123 497 PANTHER ENDOGLUCANASE 24 10 496 - -
Sto10g0123 497 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 391 417 IPR018221 -
Sto10g0123 497 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 464 482 IPR033126 -
Sto10g0123 497 Pfam Glycosyl hydrolase family 9 28 488 IPR001701 GO:0004553|GO:0005975
Sto10g0123 497 Gene3D - 24 494 IPR012341 GO:0005975
Sto10g0123 497 PANTHER ENDO-1,4-BETA-GLUCANASE 10 496 - -
Sto10g0123 497 SUPERFAMILY Six-hairpin glycosidases 26 493 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0123 Sto-Chr10 943136 945995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0123 9 494 Glycoside Hydrolase AT1G70710 59.671 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0123 K01179 - tcc:18607692 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0123 10 943136 945995 Sto10g0123 10 943136 945995 ECH