Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0119 ATGCCAGCCTTAGCTTGTTGCGTGGATGCTGCACTATCTCCTCCCGGCTACGCTTTAGCTGGGGATAGCTCTCTTCTGGCGCCGGTCACATTTTTCGGCGTGCCTCCGGCGACGACCACCACCGACAACAACGCCGCCGTCAACGTTGCCGTTGAGAATTCCCATTGGTCACCCTCGCTGTCTGCTTCCCTATATAAGATCGATGGGTGGGGTGCTCCGTACTTTTCTGTGAATTCTTCTGGGAATATTTCTGTCCGGCCTCATGGTTCAGAGACGCTTGCCCACCAGGAGATTGATTTGCTCAAGATTGTGAAGAAGGTCTCAGATCCGAAATCCTCTGGCGGACTCGGATTGCCGCTTCCTCTCATTGTTCGGTTCCCGGACGTGCTGAAGAATCGGCTGGAATGCCTTCAATCGGCGTTCGATTATGCTATTGAATCTCAGGGATATGAATCCCATTACCAAGGTGTTTACCCTGTGAAGTGCAATCAGGACCGGTTCGTTGTGGAGGATATTGTGAAATTCGGATCTTCATTCCGTTTCGGGCTAGAGGCAGGTTCGAAGCCCGAGCTTCTCCTGGCTATGAGTTGTTTGTGCAAGGGTAATCCTGAATCCCTTCTGGTTTGCAATGGGTTTAAAGATGGTGAATATATTTCTCTGGCTTTGGTTGCGAGGAAGCTCGCATTGAATACTGTGATTGTTCTTGAGCAAGAGGAAGAGCTTGATTTGGTTATTGATTTGAGCAAGAAGCTCTGCATTCGACCTGTGATTGGAGTTCGAGCTAAGCTGAGGACCAAGCATTCGGGGCATTTTGGTTCAACTTCAGGGGAGAAAGGGAAGTTTGGTTTGACCACAACCCAGATTCTGCGGGTTGTGAGGAAGCTCGAACAAGTGGGTATGCTTGATTGCTTGCAATTGCTGCATTTCCATATTGGCTCCCAAATTCCTTCCACTACATTGCTTGCCGATGGAGTTGGAGAGGCTGCACAGATCTATTGTGAATTGGTTCGACTGGGCGCTCACATGCAAGTTATAGACATCGGAGGTGGTCTGGGCATAGACTACGATGGTTCCAAGTCGAGCGAGTCTGATATTTCTGTTGGGTATGATCTCCAAGAGTATGCTGCAGCCGTTGTTCAAGCAGTTCAGTATGTCTGTGATCGGAGATCCATCAAGCATCCCATAATCTGCAGTGAAAGTGGCAGAGCTATTGTGTCTCATCATTCTGTTTTGATCTTTGAAACGGTTTCCGCAACTTCATACCAATCACCCGCATTGTCCACTCTTGGGTTGCAATATTTGGTGGAGGGGCTGTCGGATGATGCTCGTACGGATTACCACAACCTCTCTGCGGCGGCCATTAGAGGTGAGTATGAGACCTGCTTGATTTATAGCGATCAATTGAAGCAACGATGTGTTGAACAATTCAAGCAAGGCTCTTTGGGTATAGAACAACTAGCCGCTGTCGATGGTTTGTGTGATTTGGTGAGTAAGGCAATCGGGGCAACGGACTCTGTACGCACATACCATGCCAATCTTTCTGTGTTCACTTCCATTCCCGATTTCTGGGGTATTGGGCAGCTCTTTCCCATCGTCCCCATTCATCGTCTGGAGGAGAGGCCTTCAGCGAGAGGAATTTTATCAGACTTGACCTGTGATAGTGATGGGAAAATCGACAAGTTCATAGGGGGAGAGTCGAGCTTGCCACTCCATGAACTGGAAGGTGATGGTAATGGCGGTAATGCTGGAAGGTATTATCTGGGAATGTTCTTGGGTGGGGCTTACGAGGAGGCGCTCGGAGGAGTCCACAATCTGTTCGGTGGCCCGAGCGTGGTTCGGGTGTCGCAGAGCGACGGTCCACACAGCTTCGCGGTGACGCGGGCGGTGGCAGGGCCGTCGTGTGGGGACGTCCTCCGTGTGATGCAGCACGAGCCCGAGCTCATGTTCGAGACCCTCAAGCACCGTGCGCAAGAGTTTCTTGGGCAGCAAATGGAGGATGAAGACGACAACAACAGCATCCACAATGCTTCGGCGTTGGCTTCTTGCCtcgcccgctccttcaacaacaTGCCTTATCTGTGCTGTCTGACTGCTGCCATGAATAACAATGGCTTTTATTACTGCGATAGCGACGACTTCAATGGCGTTTCTGCAGATTCTGGCGCCGGAGAAGATGAGCAGTGGTCTTATTGCTGTGCTTGA 2202 0.5005 MPALACCVDAALSPPGYALAGDSSLLAPVTFFGVPPATTTTDNNAAVNVAVENSHWSPSLSASLYKIDGWGAPYFSVNSSGNISVRPHGSETLAHQEIDLLKIVKKVSDPKSSGGLGLPLPLIVRFPDVLKNRLECLQSAFDYAIESQGYESHYQGVYPVKCNQDRFVVEDIVKFGSSFRFGLEAGSKPELLLAMSCLCKGNPESLLVCNGFKDGEYISLALVARKLALNTVIVLEQEEELDLVIDLSKKLCIRPVIGVRAKLRTKHSGHFGSTSGEKGKFGLTTTQILRVVRKLEQVGMLDCLQLLHFHIGSQIPSTTLLADGVGEAAQIYCELVRLGAHMQVIDIGGGLGIDYDGSKSSESDISVGYDLQEYAAAVVQAVQYVCDRRSIKHPIICSESGRAIVSHHSVLIFETVSATSYQSPALSTLGLQYLVEGLSDDARTDYHNLSAAAIRGEYETCLIYSDQLKQRCVEQFKQGSLGIEQLAAVDGLCDLVSKAIGATDSVRTYHANLSVFTSIPDFWGIGQLFPIVPIHRLEERPSARGILSDLTCDSDGKIDKFIGGESSLPLHELEGDGNGGNAGRYYLGMFLGGAYEEALGGVHNLFGGPSVVRVSQSDGPHSFAVTRAVAGPSCGDVLRVMQHEPELMFETLKHRAQEFLGQQMEDEDDNNSIHNASALASCLARSFNNMPYLCCLTAAMNNNGFYYCDSDDFNGVSADSGAGEDEQWSYCCA 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0119 733 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 158 176 IPR000183 GO:0003824
Sto10g0119 733 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 194 IPR000183 GO:0003824
Sto10g0119 733 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 301 314 IPR000183 GO:0003824
Sto10g0119 733 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 396 415 IPR000183 GO:0003824
Sto10g0119 733 PRINTS Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 593 606 IPR000183 GO:0003824
Sto10g0119 733 PRINTS Arginine decarboxylase signature 126 141 IPR002985 GO:0006527|GO:0008295|GO:0008792
Sto10g0119 733 PRINTS Arginine decarboxylase signature 150 164 IPR002985 GO:0006527|GO:0008295|GO:0008792
Sto10g0119 733 PRINTS Arginine decarboxylase signature 208 223 IPR002985 GO:0006527|GO:0008295|GO:0008792
Sto10g0119 733 PRINTS Arginine decarboxylase signature 234 255 IPR002985 GO:0006527|GO:0008295|GO:0008792
Sto10g0119 733 PRINTS Arginine decarboxylase signature 258 280 IPR002985 GO:0006527|GO:0008295|GO:0008792
Sto10g0119 733 PRINTS Arginine decarboxylase signature 386 403 IPR002985 GO:0006527|GO:0008295|GO:0008792
Sto10g0119 733 PRINTS Arginine decarboxylase signature 512 533 IPR002985 GO:0006527|GO:0008295|GO:0008792
Sto10g0119 733 PRINTS Arginine decarboxylase signature 537 562 IPR002985 GO:0006527|GO:0008295|GO:0008792
Sto10g0119 733 PRINTS Arginine decarboxylase signature 593 614 IPR002985 GO:0006527|GO:0008295|GO:0008792
Sto10g0119 733 SUPERFAMILY PLP-binding barrel 126 408 IPR029066 -
Sto10g0119 733 Gene3D Lyase, Ornithine Decarboxylase; Chain A, domain 1 65 616 IPR009006 GO:0003824
Sto10g0119 733 PANTHER ARGININE DECARBOXYLASE 1 733 IPR002985 GO:0006527|GO:0008295|GO:0008792
Sto10g0119 733 PIRSF ARGDC 38 688 IPR002985 GO:0006527|GO:0008295|GO:0008792
Sto10g0119 733 Gene3D - 425 505 - -
Sto10g0119 733 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 signature 2. 339 352 IPR022657 -
Sto10g0119 733 TIGRFAM speA: arginine decarboxylase 56 693 IPR002985 GO:0006527|GO:0008295|GO:0008792
Sto10g0119 733 Gene3D Alanine racemase 127 408 IPR029066 -
Sto10g0119 733 Pfam Pyridoxal-dependent decarboxylase, pyridoxal binding domain 153 406 IPR022644 GO:0003824
Sto10g0119 733 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 158 176 IPR022653 -
Sto10g0119 733 PANTHER ARGININE DECARBOXYLASE 1 733 - -
Sto10g0119 733 CDD PLPDE_III_ADC 117 614 IPR002985 GO:0006527|GO:0008295|GO:0008792
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0119 K01583 - twl:119992284 1152.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0119 10 917332 919563 Sto10g0119 10 917332 919563 ECH