Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0104 atGGAAGTTAGCCTCTCTTCCAATCACTACACTCTCAGCTTAGCCTCACGCGCTCCTTCTCCTTTCTCCCTCCCCAATCTCCGATCCATCCGCACGCACTTCCTTGGTTCTTCGCACAATCTCAGGCCTCCGGGACGTCTTCGCTCTGCTAGAGATAAATGCAAGAAGTTGCGCCTTCTTCATCACCATTCGCCGCACTTTATCTTCAGAGCATCTTTGAGTTCTCACTCCATCATTGTCGTCGTCACCTTAGTTACTTTGTCTGCTGTTTCGCTCTTCTACTACAGTCTGAACAAGAGAAAGAAGGATTCCAAAGAGATACTGCGACGCCCAAAATTTGCGTTACAACAACAAGGAAGTGATATTGGGAACCCGGCCATAGAAAGCCAGATTCTTTGCTTTCAGGAATTTCAAGGGGAGAACTTACTGAAAGAAATTGGGATATTGGAGGATAAATCTGGAGAAGACAACCATGATTTTGAGGGAAAAGATTCCCAGCTAACATATTGGAGATCTTCTATGGTTCAAGAAGAGGCCATCACGAATAAGAAATTAGAGTCACCTTCTGATGTTCTTGCCTCTAGTCTTAAGAATGCTTCATCTTCAAACAGCTCCAAGTTTGTGGATGAATCTTGTTTATCCATGGACTTCCAATCAGGTTCATTTGAACCTCTGTCTTTTGCCGCAGAAATGACTGAATTACAAGTGAAAGAAACTCAAGATAAAAAAACTCACTCTGATTCTGAGTTGCCTATAATTATGGACAAATCTGAGCATACTGCTTCTTTTAATTGTATAGACAATGCAATCACAATAGTGGAAGAACGTGGTAGAGAAAAAATTGAACTTGATACCATAAGCAGCGATGTCCTAACTGGTGAACCAGTAAGGGAAGAACTCCACATGTTTTATCAGGTCAACAAGTCCGAAACAGGATCTATGACCCCATTGAGTAGTCTAAAATCATCATCCTCTCATGCTTCATTcatgaagaaaaaagaattatacTCCATAATGGGGAATGGTACTTTAAAAGGACCAAAATTACTAAATGAGGCTTCTTTACAAATTGCAGAGAATGTTGAAGGAGGGGAAGCAAGAGCCGGTTACAAAGAAGGCTACCTCGAGCAAAATGGAAGTAAATTCTTGAGGAAAGtTTCCCCCCAGATTCCCCCCTCAGTCAGGGAGCGTGTTGATCAGAAAAGTCATCATTCTCAACATTTAAGCACATATAATTCTTTGCTAAAAGCTGGAAGGTTGCAAGAGTGTGTAGAATTGCTTAAAGATATGGAAATGAAGGGACTTTTAGATATGACTAAGGTTTATCATGCAAAGTTTTTTAAACTCTGCAAGAGACAAAAGGCTGTTAGAGAAGCTTATGATTACTCTAAGCTTATTCCAAATCCAAAATTGAGTACATTTAATATGCTAATGTCAGTGTGTTCAAGCTCTCAGGATTCAGAAGGGGCTTTCCAAGTTCTGCAGCTTGTTCAGGAGGCTGGGTTCAAACCCGATTGCAAACTTTATACCACTCTGATATCAACATGTGCTAAGAGTGGTAAAGTTGATCAAATGTTTGAAGTATTTCACAATATGGTTAATTCTGGAGTAGAACCTAATGTTCATACCTACGGGGCACTGATTGATGGTTGTGCTAGAGCTGGGCAAGTTGCAAAAGCATTTGGTGCTTATGGAATATTGAGGTCTAAGAAAGTGAAGCCAGATCGTGTTGTATTCAATGCACTTATAGCTGCATGTGCTCAGACAGGAGCAGTGGATCGTGCTTTTGATGTTTTAGCAGAAATGGCTGCTGAATTGCAACCTATTGAACCGGACCACATAACTGTTGGTGCATTGATGAAAGCATGCACAAATGCTGGTCAGGTTGAACGAGCACGAGAAGTGTATAAGTGGTTGCACCAATATAGTATAAAGGGAACTCCAGAGGTCTACACTATTGCCATCAATTCTTGCAGCAAAACTGGAGATTGGGAATTTGCCTGTAGTGTATACAATGACATGACTGGGAAAGGAATTCTCCCTGATGAGATGTTTCTGAGTGCACTAATAGATGTTGCTGGACATGCTGGAAAGCTGGATGCTGCCTTTGAAGTCCTAGAAGAAGCCCGCAAACGAGGAATACATATTGGAAAAATTTCTTACAGCTCGTTGATGGGAGCCTGTAGCAATGCTGGAAATTGGCAGAAAGCATTGGAGCTATATGAGGATCTTAAATCTCGTAGATTGGTTCGTACTGTTTCAACAGTGAATGCTTTGATCACTGCACTCTGTGATGGAGATCAATTTCAGAAAGCTATGGAAGTTTTGTCTGAAATGAAAGGATTAGGTCTGCGCCCAAACAGTATCACATACTCAATACTTTTAGTGGCAAGTGAGAAAGAGGACGATCTAGAAGCAGGTCAAATGCTCCTTTCTCAAGCCAAAATGGATGGTGTTTCCCCTAATCTTGTCATGTGTAGATGCATACTCGGGATGTGCTTGCGGAGATATGAGAGGGCTTGCATTATTGGTGAACCTGTTTTATCTCATGACTCAGGACATCCACATGTTAATAATAAGTGGACATCGCTGGCCTTAATGGTGTATCGTGAAACAATTGGAGATGGTACGAAGCCTACTAGTGAAGTTCTGTCACAAATTCTTGGATGCCTGCAACTCCCTTATGATGAATCTTTGAAAAATAGACTTATTGAGAACCTGGGAGTGAGTGCTGAAACTTCAAGAAGCTCGAACCTCTGCTCATTAGTAGATGGATTTGGTGAATATGATCCGCGTGCTTTTTCGCTACTTGAGGAAGCTGCTTCACTTGGAATTGTTCCATCTGTTTCTTTTAAAGTGAGTCCTATTGTTGTGGATTTAAAGGAATTGCAGATTTTTACTGCTGAGGTATACCTCCTAACTGTTTTGAAAGGTCTCAAGCATCGGCTTGCAGCAGGTACAAAGTTGCCCAACCTATTCATCTTATTGCCTGTAGAGAAAACTAAAGTTCCATCTCCCAAGGGGGGAAAACTTATTAACCTTTCAGGAAGGGTTGGCCAGGCAGTTGCAGCGCTATTGAAGAGACTTAGAATACCTTACCAGGGTAGTGAATCATATGGGAAGATAAGAATTAATGGGATAACTCTAAGAAAATGGCTTCAGCCAAAACTTGCATCTCCTTTCGGTGGAAAACCAGGTGACTTGAACTTATTACAGTCACGAATAGGCAAAGGTATTGGTCATCAACAGCGAAACATTCGTATGGGCAATCTATCTTTGGAttaa 3285 0.4116 MEVSLSSNHYTLSLASRAPSPFSLPNLRSIRTHFLGSSHNLRPPGRLRSARDKCKKLRLLHHHSPHFIFRASLSSHSIIVVVTLVTLSAVSLFYYSLNKRKKDSKEILRRPKFALQQQGSDIGNPAIESQILCFQEFQGENLLKEIGILEDKSGEDNHDFEGKDSQLTYWRSSMVQEEAITNKKLESPSDVLASSLKNASSSNSSKFVDESCLSMDFQSGSFEPLSFAAEMTELQVKETQDKKTHSDSELPIIMDKSEHTASFNCIDNAITIVEERGREKIELDTISSDVLTGEPVREELHMFYQVNKSETGSMTPLSSLKSSSSHASFMKKKELYSIMGNGTLKGPKLLNEASLQIAENVEGGEARAGYKEGYLEQNGSKFLRKVSPQIPPSVRERVDQKSHHSQHLSTYNSLLKAGRLQECVELLKDMEMKGLLDMTKVYHAKFFKLCKRQKAVREAYDYSKLIPNPKLSTFNMLMSVCSSSQDSEGAFQVLQLVQEAGFKPDCKLYTTLISTCAKSGKVDQMFEVFHNMVNSGVEPNVHTYGALIDGCARAGQVAKAFGAYGILRSKKVKPDRVVFNALIAACAQTGAVDRAFDVLAEMAAELQPIEPDHITVGALMKACTNAGQVERAREVYKWLHQYSIKGTPEVYTIAINSCSKTGDWEFACSVYNDMTGKGILPDEMFLSALIDVAGHAGKLDAAFEVLEEARKRGIHIGKISYSSLMGACSNAGNWQKALELYEDLKSRRLVRTVSTVNALITALCDGDQFQKAMEVLSEMKGLGLRPNSITYSILLVASEKEDDLEAGQMLLSQAKMDGVSPNLVMCRCILGMCLRRYERACIIGEPVLSHDSGHPHVNNKWTSLALMVYRETIGDGTKPTSEVLSQILGCLQLPYDESLKNRLIENLGVSAETSRSSNLCSLVDGFGEYDPRAFSLLEEAASLGIVPSVSFKVSPIVVDLKELQIFTAEVYLLTVLKGLKHRLAAGTKLPNLFILLPVEKTKVPSPKGGKLINLSGRVGQAVAALLKRLRIPYQGSESYGKIRINGITLRKWLQPKLASPFGGKPGDLNLLQSRIGKGIGHQQRNIRMGNLSLD 1094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0104 1094 Gene3D Tetratricopeptide repeat domain 718 806 IPR011990 GO:0005515
Sto10g0104 1094 Pfam PPR repeat 412 435 IPR002885 -
Sto10g0104 1094 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 647 681 IPR002885 -
Sto10g0104 1094 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 752 786 IPR002885 -
Sto10g0104 1094 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 470 504 IPR002885 -
Sto10g0104 1094 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 540 574 IPR002885 -
Sto10g0104 1094 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 682 716 IPR002885 -
Sto10g0104 1094 SUPERFAMILY ARM repeat 621 753 IPR016024 -
Sto10g0104 1094 Pfam Pentatricopeptide repeat domain 775 833 IPR002885 -
Sto10g0104 1094 Gene3D Tetratricopeptide repeat domain 450 606 IPR011990 GO:0005515
Sto10g0104 1094 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 717 751 IPR002885 -
Sto10g0104 1094 Gene3D Tetratricopeptide repeat domain 607 717 IPR011990 GO:0005515
Sto10g0104 1094 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN MRL1, CHLOROPLASTIC 71 1094 - -
Sto10g0104 1094 Pfam Pentacotripeptide-repeat region of PRORP 620 761 IPR033443 -
Sto10g0104 1094 Pfam Pentacotripeptide-repeat region of PRORP 472 613 IPR033443 -
Sto10g0104 1094 TIGRFAM PPR: pentatricopeptide repeat domain 542 575 IPR002885 -
Sto10g0104 1094 TIGRFAM PPR: pentatricopeptide repeat domain 650 683 IPR002885 -
Sto10g0104 1094 TIGRFAM PPR: pentatricopeptide repeat domain 755 787 IPR002885 -
Sto10g0104 1094 TIGRFAM PPR: pentatricopeptide repeat domain 508 541 IPR002885 -
Sto10g0104 1094 TIGRFAM PPR: pentatricopeptide repeat domain 719 751 IPR002885 -
Sto10g0104 1094 TIGRFAM PPR: pentatricopeptide repeat domain 473 506 IPR002885 -
Sto10g0104 1094 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 575 605 IPR002885 -
Sto10g0104 1094 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 505 539 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0104 411 822 Glycosyltransferase AT1G05670 26.379 2.11e-38 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0104 - - gmx:100814164 1367.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0104 10 778673 788012 Sto10g0104 10 778673 788012 ECH