Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0103 ATGGAGAGTGATTCAGGCACAATCAAGAAGAAAAGTGGTGGAAATGGACAGGTTCTGGATGGTtcgaatattatggagttagtTGGAAACGAGCAAGTTTTCAGCAATTTCGTGGACCATAAGTTTCAGGAGCTTGATAGAGACAGAGACGGGAAGCTCTCTGTGAAGGAGCTTGAGCCTGCCGTTGCTGATATCGGTGCCGCTCTCGGTTTGCCCGCTCAGGGTACAAATCCTGATTCCGATCACATTTATTCTGAGGTCTTGAACGAATTCACCCATGGCAAGCAAGAGAAAGTGAGCAAGACTGAGTTCAAAGAGGTACTCTCAGACATTCTGTTGGGCATGGCTGCTGGGCTGAAGCGAGACCCAATTGTGATACTCCGCATAGATGGGGAAGATCTCCTTGAGTTTGTTAATGGACCCGGTTATGAGGCAGAAATGGCATCTATATTCACCCAGATTGAGCCTCAAGATGGATCACTTCGTGAACATATAATGGAAGCTCTGGGAAAACTCACTGTTGAGCAAGGAATTCCTCCTACTTCAGATTCTTGGgtttttAACAACATTATAGAACCGGTTCTGCAATCTCTAGCTGGCCCGGATTGGGATAGACCTGTTTCTCAAGAGACATTTTTGGTGGAATTTAAGAAAGTGGCATCTAGTATTGCTGATCGTCTGAAGGAGCAACCTGTCATTGTTGCTCACAGTGAGAACACCTTTGATGGAAGTGGCATTAAGAGACTATTATCCAACAAGTTTGAATTAGAAAAGACATTGAACTCGGCTTTGGAAAATATACCAAAAGATCGCAATGGAAAACTGTCAAAGGAGTATCTGCGGCTGGCACTAGATGTGGTGTCTCCATCTGCTGGTTTACCTCCAGTTGGTGCAATTGAAGAGATGGATAAAGTTATTGGTGAAGTCTTCAAGATGATAAATGCAGACGATGGGAAGATGGTTAAAGAAGACGAGTTCAAGAAAATGTTAACTGAAATACTGGGGAGTATAATGTTGCAGTTAGAGGGCAATCCCATATCAGTTTCTTCAAATTCAGTTGTGCATGAGCCTCTAGGCACTTCTTCTTCGCTTTTGCTGCCAGCTTCTGGTGAAGCGGCATAG 1122 0.434 MESDSGTIKKKSGGNGQVLDGSNIMELVGNEQVFSNFVDHKFQELDRDRDGKLSVKELEPAVADIGAALGLPAQGTNPDSDHIYSEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFVNGPGYEAEMASIFTQIEPQDGSLREHIMEALGKLTVEQGIPPTSDSWVFNNIIEPVLQSLAGPDWDRPVSQETFLVEFKKVASSIADRLKEQPVIVAHSENTFDGSGIKRLLSNKFELEKTLNSALENIPKDRNGKLSKEYLRLALDVVSPSAGLPPVGAIEEMDKVIGEVFKMINADDGKMVKEDEFKKMLTEILGSIMLQLEGNPISVSSNSVVHEPLGTSSSLLLPASGEAA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0103 373 Coils Coil 246 266 - -
Sto10g0103 373 Gene3D - 147 345 - -
Sto10g0103 373 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 372 - -
Sto10g0103 373 SMART efh_1 305 333 IPR002048 GO:0005509
Sto10g0103 373 SMART efh_1 259 287 IPR002048 GO:0005509
Sto10g0103 373 SMART efh_1 37 65 IPR002048 GO:0005509
Sto10g0103 373 SUPERFAMILY EF-hand 41 344 IPR011992 -
Sto10g0103 373 ProSiteProfiles EF-hand calcium-binding domain profile. 33 68 IPR002048 GO:0005509
Sto10g0103 373 Gene3D - 17 119 - -
Sto10g0103 373 Pfam EF-hand domain pair 41 107 IPR002048 GO:0005509
Sto10g0103 373 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 372 - -
Sto10g0103 373 ProSitePatterns EF-hand calcium-binding domain. 46 58 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0103 Sto-Chr10 764202 768479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0103 17 369 EF-hand Containing Proteins AT4G38810 68.820 4.50e-178 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0103 - - gmx:100820516 606.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0103 10 764202 768479 Sto10g0103 10 764202 768479 ECH