Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0100 atgggaaTAGAAGGTGTTCTGAATGGTGTGACAAAGAAGGCCAACCCAAACAAAGCTACTATTTTAGCTCTTGGCAAGGCCTTCCCTCATCAGCTTGTCATGCAAGAGTATTTAGTTGATGGGTATTTCAGAAACACCAATTGTGATAATCCTGAGCTCAAGCAGAAGCTGACTAGACTATGCAAGACAACCACTGTGAAAACAAGGTATGTGGTCATGTCTGATGAGATACTAGAAAAGTACCCAGAACTTACACTTGAGGGCCTCCCAACTGTAAAGCAACGGCTAGAAATCTGTAATGAGGCAGTCACTCAAATGGCCATTGAAGCTTCCCAAGTTTGTATCAAGAACTGGGGTAGGCCTTTATCAGACATAACCCACCTGGTTTATGTCTCTTCAAGTGAAGTTAGACTACCTGGGGGTGACCTTCATCTAGCCAGAGGGCTAGGACTCAGCCCTCAAACTCAGAGAACCTTGCTCTATTTCGTAGGTTGCTCTGGAGGGGTGGCCGGCCTTCGAGTTGCCAAAGACATAGCTGAGAACAACCCGGGGAGCCGGGTCCTGCTCGCTACTTCTGAAACCACTATTATTGGGTTCAAACCACCAAGTGCAGATAGACCCTATGATCTTGTGGGCGTGGCACTATTTGGGGATGGTGCTGGTGCTATGGTCATTGGGTCAGACCCTGTGTTGGGAACTGAAAGACCTCTCTTTGAGCTTCACACAGCAGTGCAGGAGTTTCTTCCAGACACAGAGAAGAAGATTGATGGGAGGCTAACAGAAGAAGGTATAAGCTTCAAGCTAGCAAGAGAGGTTCCTCAGATAATAGAAGATAACATTGAGGGGTTCTGTGAGAAGCTGATGGAAGTTTCTAGATTCAACAACAAGGATTATAATAAGCTATTTTGGGCTGTTCATCCAGGTGGGCCTGCAATACTGAATAGGATTGAGAAGAGACTTGAATTAGTGCCAGAGAAGCTGAATGCAAGTAGACAAGCTCTAATGGATTATGGTAACGCTAGCAGTAATACCATTGTGTATGTGCTGGAGAATATGATAGAACAAGGTTTGAAGAATAAACTggatgaaggagaaggagatgCTGGAACTGAATGGGGCCTGATATTAGCTTTTGGACCAGGGATTACTTTTGAGGGGATTCTAGCAAGGAATCTAACAGCCTGA 1185 0.4414 MGIEGVLNGVTKKANPNKATILALGKAFPHQLVMQEYLVDGYFRNTNCDNPELKQKLTRLCKTTTVKTRYVVMSDEILEKYPELTLEGLPTVKQRLEICNEAVTQMAIEASQVCIKNWGRPLSDITHLVYVSSSEVRLPGGDLHLARGLGLSPQTQRTLLYFVGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMVIGSDPVLGTERPLFELHTAVQEFLPDTEKKIDGRLTEEGISFKLAREVPQIIEDNIEGFCEKLMEVSRFNNKDYNKLFWAVHPGGPAILNRIEKRLELVPEKLNASRQALMDYGNASSNTIVYVLENMIEQGLKNKLDEGEGDAGTEWGLILAFGPGITFEGILARNLTA 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0100 394 Gene3D - 237 391 IPR016039 GO:0016746
Sto10g0100 394 Gene3D - 5 236 IPR016039 GO:0016746
Sto10g0100 394 SUPERFAMILY Thiolase-like 236 390 IPR016039 GO:0016746
Sto10g0100 394 Pfam Chalcone and stilbene synthases, C-terminal domain 239 392 IPR012328 -
Sto10g0100 394 PIRSF PKS_III 8 394 IPR011141 GO:0009058|GO:0016747
Sto10g0100 394 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 13 392 IPR011141 GO:0009058|GO:0016747
Sto10g0100 394 SUPERFAMILY Thiolase-like 16 232 IPR016039 GO:0016746
Sto10g0100 394 Pfam Chalcone and stilbene synthases, N-terminal domain 12 229 IPR001099 -
Sto10g0100 394 CDD CHS_like 19 388 - -
Sto10g0100 394 PANTHER TYPE III POLYKETIDE SYNTHASE B 13 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0100 Sto-Chr10 756890 758422 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0100 79 363 Miscellaneous Gene Families AT4G34250 25.159 6.64e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0100 - - rcu:8285152 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0100 10 756890 758422 Sto10g0100 10 756890 758422 ECH