Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0095 atGGCAGTAACTTCAACATCACTCGCTTCCCAACTTTCTGGTCGCCTCCGTCGATCCTGCTCCAAGCTCGATCACTTCAACTCTCACTCCTTCTTCGACAGCATTCATTCCAATCTCCGCCTCTCCGTCGCCGGAAAGCCCTGCCGCGGCGTCGTTGCCATGGCCGGCTCTGGAAAGTTCTTTGTTGGTGGCAACTGGAAGTGTAATGGGACAAAAGAGTCTATCAGCAAGCTTATCTCTGACTTGAATGCTGCAAAATTGGAGCCTGATGTTGATGTTGTTGTTGCACCTCCCTTTCTGTACATCGATCAGGTGAAAAACTCCATAACAGATCGGATTGAAGTATCTGCTCAGAACTCTTGGGTGGGAAAAGGTGGAGCTTTCACTGGAGAAATCAGTGTGGAACAACTAAAAGACACAGGCTGCAAGTGGGTTATTCTTGGACATTCTGAGCGAAGACATATTATTGGAGAAAATGATGAGTTTATAGGAAAGAAAGCTGCCTATGCTTTGAGCCAGGGTGTTGGGGTGATAGCCTGCATCGGGGAACTATTACAAGAGAGGGAAGCTGGGAAAACTTTCGATGTTTGTTTCCAGCAATTGAAGGCTTATGCGGATGCAGTGCCTAGTTGGGATAATATAGTTATTGCATATGAGCCTGTATGGGCCATTGGAACTGGCAAAGTGGCCACACCTGAGCAAGCTCAGGAAGTACATGTAGCTGTTCGTGATTGGCTGAAGAAGAATGTCTCAGCCGAAGTTGCTTCTAAAACACGAATTATCTATGGAGGGTCTGTTAATGGGAGCAATTGTGCTGAGCTTGCGAAGAAAGAAGATATTGATGGATTTCTTGTTGGTGGTGCTTCTTTGAAGGGTCCTGAGTTTGCTGTCATCGTCAATTCAGTCACATCCAAGAAAGTTGCGGCTTGA 930 0.4656 MAVTSTSLASQLSGRLRRSCSKLDHFNSHSFFDSIHSNLRLSVAGKPCRGVVAMAGSGKFFVGGNWKCNGTKESISKLISDLNAAKLEPDVDVVVAPPFLYIDQVKNSITDRIEVSAQNSWVGKGGAFTGEISVEQLKDTGCKWVILGHSERRHIIGENDEFIGKKAAYALSQGVGVIACIGELLQEREAGKTFDVCFQQLKAYADAVPSWDNIVIAYEPVWAIGTGKVATPEQAQEVHVAVRDWLKKNVSAEVASKTRIIYGGSVNGSNCAELAKKEDIDGFLVGGASLKGPEFAVIVNSVTSKKVAA 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0095 309 ProSitePatterns Triosephosphate isomerase active site. 217 227 IPR020861 GO:0004807
Sto10g0095 309 PANTHER TRIOSEPHOSPHATE ISOMERASE 2 307 IPR000652 GO:0004807
Sto10g0095 309 Hamap Triosephosphate isomerase [tpiA]. 58 301 IPR022896 GO:0004807|GO:0006096
Sto10g0095 309 ProSiteProfiles Triosephosphate isomerase (TIM) family profile. 59 301 IPR000652 GO:0004807
Sto10g0095 309 SUPERFAMILY Triosephosphate isomerase (TIM) 57 301 IPR035990 GO:0004807
Sto10g0095 309 CDD TIM 60 300 IPR000652 GO:0004807
Sto10g0095 309 Gene3D Aldolase class I 45 308 IPR013785 -
Sto10g0095 309 Pfam Triosephosphate isomerase 61 301 IPR000652 GO:0004807
Sto10g0095 309 PANTHER TRIOSEPHOSPHATE ISOMERASE, CHLOROPLASTIC 2 307 - -
Sto10g0095 309 TIGRFAM tim: triose-phosphate isomerase 61 291 IPR000652 GO:0004807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0095 Sto-Chr10 722892 726258 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0095 K01803 - gmx:100819824 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0095 10 722892 726258 Sto10g0095 10 722892 726258 ECH