Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0082 ATGTCGAGCATCGTCAAGGAGATCCTGGCGGGCCCGATACAGATGGCGGACCAGGTGATCAAGATGGCGGATGAGGCCGCCACCTTCAAGCAGGAATGTTTGGAGGTGAAGGCCAAGACGGAGAAGCTCGCGGCGTTGCTCCGGCAGGCGGCGAGGGCCAGCAACGATCTCTACGAGCGGCCGACGCGGCGGATCATCGACGACACAGAGCAGGTCCTCGAGAAGGCGCTAGGGCTCGTCGACAAATGTTGCGGAAACAGCCTGATGAAGCGACTCTTCACCATCATCCCCGCCACGGCCTTCCGCAAGACCACGATGCAGCTCGAGAATTCCCTCGGCGACGTGCAGTGGCTCCTCCGCGTCTCCGCCTCCGCCGATGAGCGCGACGATGAGTATCTGGGTTTGCCTCCAATCGCCGCCAACGAGCCTATCTTGTGCCTCATTTGGGAACAGGTCGCGATATTGCTCTCAGGGTGCTCGATAGAAGAACGGTCAGACGCTGCCGCTTCATTGGTCTCTCTGGCTCGCGATAATGACAGGTATGGCAAATTGATCATTGAAGAAGGTGGGGTTCCTCCACTTTTGAAACTATTGAAGGAAGGGACACTAGAGGGTCAGGAGAATGCAGCGAGAGCCATTGGGTTACTTGGGAGAGACCCAGAAAGCGTAGAACAGATCGTGAATGCTGGGGTTTGCACAGTGTTTGCGAAAATCCTCAAAGAAGGAGACATGAAGGTTCAATCTGTGGTGGCTTGGGCTATCTCAGAATTAGCAGCGCATCATCCAAAATGTCAGGATCATTTTTCTCAGAATAATGCCATACGCTTGCTGGTTAGGCATCTTGCATTTGAAACTATTGAAGAACACAGCAAGTATAGTGTTGTGAGTAAGCAAAACATGTCTCTTCATTCACTGTATCTGGCGAGCAGTACTAATACCCAGACTCAAGACAAGAAAttgcaagaagaagaagataatagTAAGCAGCAGAATCAGATAGTTCGTCCTAACCAAATGCAGAATGCGGTGGCTACAACTGTGGCTAACACAATAGCATTCAAGAACCAAACCCCCCCTAGAAACACACATGTTTCAATTGCAGGAACAAGTATCAAGGGAAGGGAACATGCAGATCCAGCTACAAAAGCCCAGATGAAAGCCATGGCAGCTAGAGCTTTATGGCAACTTTCAAGAGGAAACGTTACTATATGTCATAACATTACTGAATCGAGAGCTCTTTTGTGTTTTGCTGTTCTGTTGGAGAAGGGAGCTGAAGATGTTCAGTCTTATTCAGCAATGGCTTTAATGGAGATCACAGCAGTAGCAGAACAGCACTCAGAGTTGAGGCGTTCTGCTTTCAAACCCAATTCTCCAGCTGCAAAAGCTGTGGTAGATCAGTTTCTTAGAATCATTGAGAAAGCAAACTGTGATCTTCTTGTGCCCTGCATCAAAGCTATTGGTTGTTTGGCAAGGACTTTCAGAGCAACAGAAACAAGAATCATAGCTCCACTGGTGAGGCTGCTTGATGAAAGAGAGCCAGAGGTTTCAATGGAAGCCACAATAGCTCTTATAAAGTTTGCTTGCACTGATAATTTCCTGCATGAGACTCACTGTAATGCCATTATAGCAGCAGGAGGAGCAAAGCACTTGATCCAATTAGTGTACTTTGGGGAACAAATGGTGCAGATTCCAGCATTGAAGCTTCTATGTTATATAGCACTGCATGTGCCCAAGAATGAGACACTTGCACAGGAACAAGTGCTTATAGTTCTGGAATGGGGAACAAAACAGGCGCATCTGATGGAAGAACCCACCATTGGAGAACTGTTAACAGAAGCCAAGAGTAGATTGGAACTCTATCAATCAAGAGGTACAAGAGGATACCACTGA 1890 0.4778 MSSIVKEILAGPIQMADQVIKMADEAATFKQECLEVKAKTEKLAALLRQAARASNDLYERPTRRIIDDTEQVLEKALGLVDKCCGNSLMKRLFTIIPATAFRKTTMQLENSLGDVQWLLRVSASADERDDEYLGLPPIAANEPILCLIWEQVAILLSGCSIEERSDAAASLVSLARDNDRYGKLIIEEGGVPPLLKLLKEGTLEGQENAARAIGLLGRDPESVEQIVNAGVCTVFAKILKEGDMKVQSVVAWAISELAAHHPKCQDHFSQNNAIRLLVRHLAFETIEEHSKYSVVSKQNMSLHSLYLASSTNTQTQDKKLQEEEDNSKQQNQIVRPNQMQNAVATTVANTIAFKNQTPPRNTHVSIAGTSIKGREHADPATKAQMKAMAARALWQLSRGNVTICHNITESRALLCFAVLLEKGAEDVQSYSAMALMEITAVAEQHSELRRSAFKPNSPAAKAVVDQFLRIIEKANCDLLVPCIKAIGCLARTFRATETRIIAPLVRLLDEREPEVSMEATIALIKFACTDNFLHETHCNAIIAAGGAKHLIQLVYFGEQMVQIPALKLLCYIALHVPKNETLAQEQVLIVLEWGTKQAHLMEEPTIGELLTEAKSRLELYQSRGTRGYH 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0082 629 PANTHER ARMADILLO REPEAT ONLY 4 1 629 - -
Sto10g0082 629 Pfam Armadillo/beta-catenin-like repeat 184 215 IPR000225 GO:0005515
Sto10g0082 629 Pfam Armadillo/beta-catenin-like repeat 219 259 IPR000225 GO:0005515
Sto10g0082 629 Gene3D - 370 606 IPR011989 -
Sto10g0082 629 SMART arm_5 400 440 IPR000225 GO:0005515
Sto10g0082 629 SMART arm_5 177 218 IPR000225 GO:0005515
Sto10g0082 629 SMART arm_5 219 259 IPR000225 GO:0005515
Sto10g0082 629 SMART arm_5 534 574 IPR000225 GO:0005515
Sto10g0082 629 Gene3D - 3 121 IPR036537 GO:0007166
Sto10g0082 629 MobiDBLite consensus disorder prediction 313 332 - -
Sto10g0082 629 Gene3D - 148 323 IPR011989 -
Sto10g0082 629 SUPERFAMILY ARM repeat 155 581 IPR016024 -
Sto10g0082 629 Coils Coil 36 56 - -
Sto10g0082 629 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 189 231 IPR000225 GO:0005515
Sto10g0082 629 PANTHER ARMADILLO REPEAT ONLY 1 1 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0082 Sto-Chr10 631442 633382 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0082 - - gmx:100807066 926.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0082 10 631442 633382 Sto10g0082 10 631442 633382 ECH