Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0072 ATGGCAAAATTATATAGCAATGCCATGCTTTTAGTAGCACTTCTTTCCATCGCCGTCGTAGCTCATGCATTGAACGACACTGTCACTTATGATGGAAGGTCTCTGTTGATCAATGGAAGACGTGACCTGTTTTTGTCTGGTTCCATCCATTACACTCGTAGTACCCCTGAGATGTGGCCAGACCTTCTCAACAAGGCAAGACATGGAGGTTTGAATGTGATTCAGACTTACGTGTTCTGGAACGCTCATGAGCCAGTGAAAGGCCAGTATAACTTTGAAGGAAACTATGATGTGGTGAAGTTCATTAAGCTTATTCATAAGTATGGAATGTATGTAACTCTGAGGCTTGGACCTTTCATCCAGGCCGAATGGAATCATGGaGGACTTCCATACTGGCTTAAAGAGGTACCAGACATCGTCTTCCGATCTGACAATGAACCCTTCAAGTTCTACATGAAACAATTCGTGACAAAGGTGATAGACATGATGAAAGCAGAGAAATTGTTTGCCAGCCAAGGAGGCCCTATCATCTTGGCACAGATTGAGAATGAGTACAATCATGTCCAACTTGCCTATAGAGAAAAAGGAGATAGCTATGTTCGGTGGGCTGCAAGTATGGCAGTGGCAACCAAGATTGGAGTTCCATGGATCATGTGTGAGCAACTCGAAGCTCCTGATCCAGTTATCAATGCTTGCAACGGAAGGCACTGTGGCGATACTTTTGAAGGACCTAACAAACCATACAAGCCTAGAATATGGACTGAAAACTGGACTGCCCAATATAGAAAATTCGGTGATCCACCGGCTGAGAGATCTGCAGAAGATACTGCTCTTTCAATTGTCCGCTTCTTCGTTAAGGAAGGATGTTTGGCCAATTACTATATGTACCATGGAGGAACAAACTTCGGCAGAACATCCTCTGCTTATACTTCAACTCGTTATTACGATGAAGCTCCTCTTGATGAGTTCGGTCTGCAGAGAGAACCTAAATGGGGTCACCTCAGGGATGTTCACAAGGCTGTAAACCTTTGTAAGAAGGCTCTCCTCTTTACAACACCAAGTGTCACCAAGCCAGATGCAAACACTGAGATTTGGGTCTTCGGGAAGCCAGAAAGTAGTACATGTGCTGCTTTCTTGATTAACAACCACACTATAATTGATGCAAATGTAAACTTTAGAGGCCGAAATTATCTTTTGCCACCTCGTTCCGTGAGCGTCCTCCCTGATTGCAAGACTGTGGTGTTCAACACTGGCAGAATTGTGTCGCAACACAATTCAAGGACCTTCAAGAAATCACACCTTGCAGGCATCAACAAGTGGGAGGTGTTTTCAGAACCCATTCCAACTACCAAGGAAGTACCCGTCAATCAGGATAGACCTCAGGAACTTTACACCTTACTTAGAGATACCACTGACTATGGGTGGTACACCACTAAGATCGTGGTGACTCCAGAAGATCTGTCAAAGAAGGGTGGAATATCCCCTGTTCTTCGTATCATGAGTCTTGGCCATTCACTGCTTGCATTTGTAAATGGAGAGTTCGTTGCAAATGCTCACGGTAGATATAAGAATAGTGTTTTCACATTggagaaaaagataaaattaaaggtTGGGGTCAACCATATAGCTATGTTGGCTGCTACAGCTGGACTCCCGGACAATGGTGCAAACATGGAGCACAGGTTTGCCGGACCCGAAGTTGTAAATATCCTTGGTCTGAACACAGGAACTATTGATCTGACAGAAAACGGATGGGGGCATAAGGTTGGTCTCTTAGGTGAAAAGCTTAAAATTTTCACTGAGGAAGGATCAAAGAATGTAAAATGGAAGAAAGCCAAAGGAGCCCAACCAGCTCTGACTTGGTATAAGGCAAGATTTAACGCCCCAGAAGGAAGAAATCCCGTTGCCATCAGAATGAAAGATATGGGGAAGGGAATGGTTTGGGTGAATGGTTTTAACATTGGTCGTCACTGGCCAAGCTTCAAAAGTGTGGCTGGATTGCGTACTAATCAGACAGAGTACCACATCCCAAGATCTGTGCTGAAACTGAAAGACAATTTACTAGTTATACTGGAGGAGGAACCTGTATCACCAGAAGGAATCGAGATCGTAACTGTGCACAGAGATAGAATCTGCAGTTTAATCACAGATAATCACCCACCGAATGTGAGACACTGGAATGGTAAGATGCAGCAATTCCCAAGTGGCGTGATGCGAGGAGCCGTATTGAATTGCCCGAACCACAAGAAGATCAGAGCCGTGGAATTCGCGAGCTTCGGAAACCCTACTGGTTTCTGCGGAGATTTCCAGATGGGAAGTTGCAATGTGGAGGCGACGAAGCAGATTGTGGAGCAAAGATGCTTGGGAAAAGTGAAGTGTCATGTTCCAATGGATCCTGCGGTTTTCTTGAAGCACGGTGATGCTTGCCCTGGTGTGGTGAAGGCCCTAGCCATCCAAGTGCAGTGCGCTTAG 2472 0.4474 MAKLYSNAMLLVALLSIAVVAHALNDTVTYDGRSLLINGRRDLFLSGSIHYTRSTPEMWPDLLNKARHGGLNVIQTYVFWNAHEPVKGQYNFEGNYDVVKFIKLIHKYGMYVTLRLGPFIQAEWNHGGLPYWLKEVPDIVFRSDNEPFKFYMKQFVTKVIDMMKAEKLFASQGGPIILAQIENEYNHVQLAYREKGDSYVRWAASMAVATKIGVPWIMCEQLEAPDPVINACNGRHCGDTFEGPNKPYKPRIWTENWTAQYRKFGDPPAERSAEDTALSIVRFFVKEGCLANYYMYHGGTNFGRTSSAYTSTRYYDEAPLDEFGLQREPKWGHLRDVHKAVNLCKKALLFTTPSVTKPDANTEIWVFGKPESSTCAAFLINNHTIIDANVNFRGRNYLLPPRSVSVLPDCKTVVFNTGRIVSQHNSRTFKKSHLAGINKWEVFSEPIPTTKEVPVNQDRPQELYTLLRDTTDYGWYTTKIVVTPEDLSKKGGISPVLRIMSLGHSLLAFVNGEFVANAHGRYKNSVFTLEKKIKLKVGVNHIAMLAATAGLPDNGANMEHRFAGPEVVNILGLNTGTIDLTENGWGHKVGLLGEKLKIFTEEGSKNVKWKKAKGAQPALTWYKARFNAPEGRNPVAIRMKDMGKGMVWVNGFNIGRHWPSFKSVAGLRTNQTEYHIPRSVLKLKDNLLVILEEEPVSPEGIEIVTVHRDRICSLITDNHPPNVRHWNGKMQQFPSGVMRGAVLNCPNHKKIRAVEFASFGNPTGFCGDFQMGSCNVEATKQIVEQRCLGKVKCHVPMDPAVFLKHGDACPGVVKALAIQVQCA 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0072 823 Pfam Beta-galactosidase jelly roll domain 607 691 IPR025300 -
Sto10g0072 823 Pfam Galactose binding lectin domain 743 822 IPR000922 GO:0030246
Sto10g0072 823 Pfam Beta-sandwich domain in beta galactosidase 348 420 IPR041392 -
Sto10g0072 823 Gene3D - 591 716 - -
Sto10g0072 823 SUPERFAMILY Galactose-binding domain-like 404 555 IPR008979 -
Sto10g0072 823 Gene3D - 738 823 IPR043159 -
Sto10g0072 823 Gene3D - 418 557 - -
Sto10g0072 823 PANTHER GLYCOSIDE HYDROLASE FAMILY 35 PROTEIN 11 819 - -
Sto10g0072 823 SUPERFAMILY (Trans)glycosidases 25 344 IPR017853 -
Sto10g0072 823 Pfam Glycosyl hydrolases family 35 34 340 IPR031330 -
Sto10g0072 823 Gene3D Glycosidases 23 344 - -
Sto10g0072 823 PRINTS Glycosyl hydrolase family 35 signature 38 55 IPR001944 GO:0004553|GO:0005975
Sto10g0072 823 PRINTS Glycosyl hydrolase family 35 signature 59 77 IPR001944 GO:0004553|GO:0005975
Sto10g0072 823 PRINTS Glycosyl hydrolase family 35 signature 114 133 IPR001944 GO:0004553|GO:0005975
Sto10g0072 823 PRINTS Glycosyl hydrolase family 35 signature 171 186 IPR001944 GO:0004553|GO:0005975
Sto10g0072 823 PRINTS Glycosyl hydrolase family 35 signature 252 267 IPR001944 GO:0004553|GO:0005975
Sto10g0072 823 PRINTS Glycosyl hydrolase family 35 signature 289 304 IPR001944 GO:0004553|GO:0005975
Sto10g0072 823 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Sto10g0072 823 PRINTS Glycosyl hydrolase family 35 signature 617 631 IPR001944 GO:0004553|GO:0005975
Sto10g0072 823 PRINTS Glycosyl hydrolase family 35 signature 644 660 IPR001944 GO:0004553|GO:0005975
Sto10g0072 823 PANTHER BETA-GALACTOSIDASE RELATED 11 819 IPR001944 GO:0004553|GO:0005975
Sto10g0072 823 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 173 185 IPR019801 GO:0004553|GO:0005975
Sto10g0072 823 ProSiteProfiles SUEL-type lectin domain profile. 743 823 IPR000922 GO:0030246
Sto10g0072 823 SUPERFAMILY Galactose-binding domain-like 583 729 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0072 Sto-Chr10 535911 539912 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0072 28 823 Glycoside Hydrolase AT2G16730 58.531 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0072 - - gmx:102663614 1138.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0072 10 535911 539912 Sto10g0072 10 535911 539912 ECH
Sto2g0977 2 8539708 8544382 Sto10g0072 10 535911 539912 ECH