Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0054 ATGATCGTCTGTGTCGCCGTTGTAGGTCACCAGAACAACCCGCTGTATATTCAGAGCTTCACTGAAGCCGATGATGCTCTCAAGCTCCATCATATCGTCCACTGCTCTCTCGACGTAGTTGACGAGCGAGTGAACAATCCTAAAAAATCAGGACCGATGCTGAATGAGACATTTTTGGGTCTGCTTTATCCTACTGATAATTACAAAGTCTACGGTTATCTGACTAATACAAAGGTGAAGTTTATTTTGGTGACAACTGATCTGGATGTTAGAGATGCAGATGTAAGAAATTTTTTCAGGAAATTCCATACTGCATATGTAGATGCGGTTTCAAACCCATTTCATGTGCCAGGTAAAAAGATAACCTCCAGAATTTTTGCAGAAAGGGTGAGCACAATTGTCAAGTCATTTGGTTTAAATTCAGCTGGGTGA 432 0.412 MIVCVAVVGHQNNPLYIQSFTEADDALKLHHIVHCSLDVVDERVNNPKKSGPMLNETFLGLLYPTDNYKVYGYLTNTKVKFILVTTDLDVRDADVRNFFRKFHTAYVDAVSNPFHVPGKKITSRIFAERVSTIVKSFGLNSAG 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0054 143 PANTHER BNAA06G40850D PROTEIN 1 138 - -
Sto10g0054 143 CDD TRAPPC2L 3 134 IPR044760 GO:0006888
Sto10g0054 143 Pfam Sedlin, N-terminal conserved region 7 135 IPR006722 GO:0006888
Sto10g0054 143 Gene3D - 1 141 - -
Sto10g0054 143 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2 1 138 IPR006722 GO:0006888
Sto10g0054 143 SUPERFAMILY SNARE-like 2 137 IPR011012 -
Sto10g0054 143 SMART Sybindin_2 17 137 IPR007233 GO:0016192|GO:0030008
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0054 K20301 - vvi:100241847 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0054 10 436285 438292 Sto10g0054 10 436285 438292 ECH