Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0053 ATGAGTTCGCATCGCTGGTTCCAGAGACCCTGCTCTTTGTGTTCCTTCCCCTTGCCTCAACTAAGCACACGAGAGCAATCCCGAGCTATGGCTTGGACAAAGGACATGGCGTATTGGCGCCGAATCGGGCAATCTAAGTTGAAGCTCTTGTCAAGTCAATTTAGAAGATGTTACATTGAGCTTCCGAACGCGTCTTTGTTGAATTCCATAGCTTCACATCGGAAACCCCCAGTTAGAGTGACGCCATATTGGGTGTTTCCGGAAAGACACACTGATGTTTGTCATAACGTGAGGTTTTTCGCTGCCCCAGTTCAGGCCAGAACGAAGAAGGAACAAAGGGACACTGGTGAGCCACGACTAAATGAGGAAATCACAGCTCGATTTGTCAGGCTTGTTATAGATGATGGACATTCAATAGTGTCAAGGTCTGAAGCACTAGAGCATGCCAGGAGGCTTAAACTTGATTTGGTAGAGGTTCAGAAAACAGCAGACCCACCTGTCTGTAAGATTATGGACTACAACAAGGAAAAGTACAAACGACAAGAGATAGAAAAGGAGCGAACAAAAATGAAGGAATTGAAAGACCTGAAGATGAAAGCAGACATGGTTAAAAATTTAATGGAGAAGGGCTACCGAGTGAAGTGCATTGGATTTGATAATCATTACATGCTTATAGGTCTCTTGAGGGCATCaggaaaagaaaatgaggaCGTGGAAGGAATACTGTCTCGTCTTTCTTCCTTGATAGAAGATGTAGCTATTGTGGAAAGTGGACCGCATGTGGGAAAAAAAGAAGCATATATGTTAGTTAGGCATGTGAAATATGGGCCAAAGAAAGGCAGTGGGAAAAAGTTGCAAGATGCAGCGCATATGTCTATTAAAGAGGCTGGTGACTATGATGAAGAAGATCAGAATCAAAGTTCTGCTGAAACAGATGAAGACATGCTCTCTGATGACAAGCATATGCCACTTTCGATGGGCAGGGCTTCTACTGCTGAAAATCATAGTCATTCAGATCCCCCTGCTATGATTGAGAATAGGTACAAACGAGGTAATCAACCATCAATCATACAAGAGCCGCCTACTCTGACTGAGAATAGGTACAAACGAAATAATTCCCCATCTTTCACACAAGAGCCTTCTGCTGTGACGGAGAATAGGTACAAACGAACTGATTCCCGGAGTAATAATAATTTCCCATCTAAGGCACAAAAGTCTCCTGTTGGTGCTGAGAACAGGTACAACAGAACTGAGCCAAGAATCAGGTTCCAACAAACAACACCACTGGATAATCCTGGTCTGACTAACAAAGGACCTGGAATAGGAGATTCATTTAAGGCAATGCCCTCAGTTTTGAATCACAAGAGGCCTGGCGCACCAGAAACTAATGTTAATTCCAAAACGGTAGTCAAGGAAGACACAATGCCTCCTCTTGAGGATCCCAAGGGTGGTCTACCTCATCCTAATGCTCCCAAGGCCCCAAGATCTGGTTATGGTATTTTTAGTTCTAATACGGGCATTGATACACCAGATGCAAGAGGAGGGATGCATCGGAGCAGATAA 1563 0.4363 MSSHRWFQRPCSLCSFPLPQLSTREQSRAMAWTKDMAYWRRIGQSKLKLLSSQFRRCYIELPNASLLNSIASHRKPPVRVTPYWVFPERHTDVCHNVRFFAAPVQARTKKEQRDTGEPRLNEEITARFVRLVIDDGHSIVSRSEALEHARRLKLDLVEVQKTADPPVCKIMDYNKEKYKRQEIEKERTKMKELKDLKMKADMVKNLMEKGYRVKCIGFDNHYMLIGLLRASGKENEDVEGILSRLSSLIEDVAIVESGPHVGKKEAYMLVRHVKYGPKKGSGKKLQDAAHMSIKEAGDYDEEDQNQSSAETDEDMLSDDKHMPLSMGRASTAENHSHSDPPAMIENRYKRGNQPSIIQEPPTLTENRYKRNNSPSFTQEPSAVTENRYKRTDSRSNNNFPSKAQKSPVGAENRYNRTEPRIRFQQTTPLDNPGLTNKGPGIGDSFKAMPSVLNHKRPGAPETNVNSKTVVKEDTMPPLEDPKGGLPHPNAPKAPRSGYGIFSSNTGIDTPDARGGMHRSR 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0053 520 MobiDBLite consensus disorder prediction 393 411 - -
Sto10g0053 520 MobiDBLite consensus disorder prediction 351 384 - -
Sto10g0053 520 PANTHER TRANSLATION INITIATION FACTOR IF3-1, MITOCHONDRIAL 36 511 - -
Sto10g0053 520 MobiDBLite consensus disorder prediction 295 520 - -
Sto10g0053 520 SUPERFAMILY Translation initiation factor IF3, C-terminal domain 191 274 IPR036788 GO:0006413
Sto10g0053 520 Gene3D - 111 187 IPR036787 GO:0003743|GO:0006413
Sto10g0053 520 MobiDBLite consensus disorder prediction 419 433 - -
Sto10g0053 520 Pfam Translation initiation factor IF-3, N-terminal domain 120 186 IPR019814 GO:0003743|GO:0006413
Sto10g0053 520 TIGRFAM infC: translation initiation factor IF-3 120 270 IPR001288 GO:0003743|GO:0006413
Sto10g0053 520 SUPERFAMILY Translation initiation factor IF3, N-terminal domain 118 189 IPR036787 GO:0003743|GO:0006413
Sto10g0053 520 Gene3D - 188 279 IPR036788 GO:0006413
Sto10g0053 520 PANTHER TRANSLATION INITIATION FACTOR IF-3 36 511 IPR001288 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0053 Sto-Chr10 427783 433477 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0053 K02520 - gmx:100808433 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0053 10 427783 433477 Sto10g0053 10 427783 433477 ECH