Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0046 ATGGCGGCCAATGCTCCTTGGAATCCCCAAGAAGAAGGCTTTAAGGAGATCTGTGGCTTATTGGAGCAGCAGATTTCTCCTTCTTCTGCTGACAAGTCTCAGATTTGGCAGAAACTCCAGCACTATTCTCAGCTTCCTGATTTCAACAATTATCTCGTTTTCATTCTTGCACGTGCTGAGGGAAAGGCGGTGGAGGTTCGACAGGCTGCAGGTCTTTATCTGAAGAATAACCTTAGAACCACATATAACTCAATGCTTCCTGCTTACCAGCAATATGTGAAATCGGAGTTGCTTCCTTGTCTTGGAGCAGCAGATAGGCACATCAGGTCTACAGTGGGAACTATTGTTAGTGTTGTTGTTCAACTTGGGGGAGTTTTGGGGTGGCCTGAACTGTTGCAAGCCCTGTTAAATTGCTTGGACAGTAATGATCTTAATCACATGGAAGGTGCTATGGATGCTTTATCCAAGATCTGTGAGGATATTCCCCAAGTACTTGATTCAGACATACCTGGGTTAGCAGAGCGCCCTATTAACATATTTCTTCCCAGATTGTTTCGGTTTTTTCAATCACCTCATGCTTCATTAAGAAAGCTTTCAGTGGGTTCTGTAAATCAGTACATTATGTTGATGCCCACTGCGTTGTATGCTTCCATGGACCAATTTCTTCAGGGTTTGTTTATTCTTGCAAATGACCCAGCTGCAGAAGTGCGAAAATTGGTTTGTGCAGCATTTGTTCAACTAATTGAAGTCCATCCATCTTTTCTAGAGCCACATCTGAGGAATGTGATTGAATACATGTTACAAGTCAACAAAGACACAGATGATGAAGTAGCTCTTGAAGCCTGTGAATTTTGGTCTGCTTTTTGTGATGCTCAACTGCCACCtgaaaaattgagagaattCTTGCCTCGTCTAATTCCAGTGTTGTTGTCAAAAATGGTTTATGCAGATGATGATGAATCGCTTGTTGAGGCTGAGGAAGATGGTTCCCTGCCAGATCGAGATCAGGATCTTAAACCTCGATTTCATGTATCAAGATTTCATGGATCAGATGACATTGAAGATGACGATGACGATGTTGTCAACACATGGAATTTACGGAAATGCAGTGCTGCTGCTCTAGATATTCTGTCAAATGTATTTGGAGATGAGATCCTTCCAACTTTAATGCCTATTGTTCAGGGCAAGTTGTCTGCCAGTGGTGATGATGCTTGGAAAGAAAGGGAAGCTGCTGTCTTGGCTCTTGGTGCCATAGGAGAGGGTTGCATTAATGGACTTTATCCTCATTTGCCCGAGATTGTGGCTTTTCTTATCCCTCTTCTAGATGATAAGTTTCCTTTAATACGAAGCATTTCATGCTGGACACTCTCCCGTTTCAGCAAATTTGTTGTTCAGAGTATTGGGGATCAAAAAGGCTATGAGCAATTTGATAATGTTCTTATGGGTCTTTTACGAAGAACTTTGGACGATAATAAGCGGGTACAAGAGGCAGCTTGTTCAGCTTTTGCAACACTGGAAGAGGAGGCAGCAGAAGAGTTAGCTCCACGCTTGGAAATTGTATTGAAGCATCTGATGACTGCCTTTCGGAAATATCAGAGACGAAATCTCAGAATTGTATATGATGCTATTGGAACTCTAGCTGAAGCTGTTGGAGGACAGCTAAATCAGCCTGGTTATCTTGATATTCTTATGCCACCATTAATTGAGAAGTGGCAGCAACTTTCAGATGCAGACAAAGATCTCTTTCCATTGCTGGAATGCTTCACATCTATTGCACATGCATTGGGTACCGGATTCTCTCAATTTTCTGAACCTGTATTTAGGAGGTGCCTAAATATAATCCAGACCCAACAAGTTGCAAAGGTTGATCCTGCTAAAGCTGGGGTTCAGTATGACAAGGAGTTCATTGTATGCTCTCTTGATCTACTTTCTGGACTAGCAGAAGGACTTGGCAGTGGAATAGAGAGTTTGGTCTCACAAAGTTCTTTGAGGGACCTTCTTCTGCATTGTTGTGTGGATGATGCTCTTGATGTGCGACAAAGTGCCTTTGCGTTACTTGGAGACCTTGCGAGGGCGTGCCCAATTCATTTGCAACCTCATTTGTCTGTGTTTATCGAGGCTGCAACCAAGCAGCTGGAAACTTCTAAGATAAGGGAAGCTATTTCAGTAGCAAATAATGCTTGCTGGGCTATTGGAGAGTTAGCAGTTAAGGTTCGTCAAGAAATGTCTCCCTTTGTTTTGACAGTTATTTCATGCTTGCTCCCAATTCTTCAGCATGCAGAGGGACTCAATAAGTCACTTGTAGAAAACAGTGCAATAACTCTGGGGAGGCTTGCATGGGTCTGCCCGGACCTGCTATCACCCCATATGGAGCACTTCATGCAATCTTGGTGCACAGCTTTGGCGATGATACGCGATGATATAGAGAAAGAGGATGCGTTTAGAGGCCTATGTGCTATGGTCAGAACCAATCCTTCTGGAGCTCTGAGTTCTTTAGTTTATATGTGCAAAGCCATCGCAAGTTGGCATGAAATAAGGAGTGAAGACTTGCGTATTGAAGTTGGTCAGGTCTTGCATGGATATAAACAGATGCTAGGCGATGGAGCATGGGACCAATGCATGTCTGCTTTGGAGTCCTCAGCAAAAGAATCTCTTTCAAAATATCAACTTCTTGTTGTGAAGCTGCCTCTTTGGCTTGCAGATGTTGGAGAGCCTTGGAATATAGAACAGAATCCATGTCTTCCAGCATTACCTTCACATTGGTCCAAATTCTCCACAAGATCTTCCAACTCCCCAATCAGCAAAAGCTCCTTCTGGCAATTTGTGACTGGCCAATACTTCAACATCCCTCTAACAACCACCCCTCCAAGCATTGGCTCCTTCTGCACAAACTGCACCACACAAGGTGGGGTCGTCATCTTCGGGGAAGTCGGAGGAGGAAGAGGGAGGGAGGGGACGGAAGAGATTGAGGGAAAGCATGGAAAGCAGGGGAGAGAGGAATTTGTGAGGAAGTGGCTTTTTGGAGGATTTGATGATGGAGAGGAGGCGCGTGAGGTGGAGACGCTTCAAGTCTTGCTGGGAAGGGGATTCAGAGGGGTCGGTGAAGGTGAATAG 3114 0.4403 MAANAPWNPQEEGFKEICGLLEQQISPSSADKSQIWQKLQHYSQLPDFNNYLVFILARAEGKAVEVRQAAGLYLKNNLRTTYNSMLPAYQQYVKSELLPCLGAADRHIRSTVGTIVSVVVQLGGVLGWPELLQALLNCLDSNDLNHMEGAMDALSKICEDIPQVLDSDIPGLAERPINIFLPRLFRFFQSPHASLRKLSVGSVNQYIMLMPTALYASMDQFLQGLFILANDPAAEVRKLVCAAFVQLIEVHPSFLEPHLRNVIEYMLQVNKDTDDEVALEACEFWSAFCDAQLPPEKLREFLPRLIPVLLSKMVYADDDESLVEAEEDGSLPDRDQDLKPRFHVSRFHGSDDIEDDDDDVVNTWNLRKCSAAALDILSNVFGDEILPTLMPIVQGKLSASGDDAWKEREAAVLALGAIGEGCINGLYPHLPEIVAFLIPLLDDKFPLIRSISCWTLSRFSKFVVQSIGDQKGYEQFDNVLMGLLRRTLDDNKRVQEAACSAFATLEEEAAEELAPRLEIVLKHLMTAFRKYQRRNLRIVYDAIGTLAEAVGGQLNQPGYLDILMPPLIEKWQQLSDADKDLFPLLECFTSIAHALGTGFSQFSEPVFRRCLNIIQTQQVAKVDPAKAGVQYDKEFIVCSLDLLSGLAEGLGSGIESLVSQSSLRDLLLHCCVDDALDVRQSAFALLGDLARACPIHLQPHLSVFIEAATKQLETSKIREAISVANNACWAIGELAVKVRQEMSPFVLTVISCLLPILQHAEGLNKSLVENSAITLGRLAWVCPDLLSPHMEHFMQSWCTALAMIRDDIEKEDAFRGLCAMVRTNPSGALSSLVYMCKAIASWHEIRSEDLRIEVGQVLHGYKQMLGDGAWDQCMSALESSAKESLSKYQLLVVKLPLWLADVGEPWNIEQNPCLPALPSHWSKFSTRSSNSPISKSSFWQFVTGQYFNIPLTTTPPSIGSFCTNCTTQGGVVIFGEVGGGRGREGTEEIEGKHGKQGREEFVRKWLFGGFDDGEEAREVETLQVLLGRGFRGVGEGE 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0046 1037 Gene3D - 4 890 IPR011989 -
Sto10g0046 1037 SUPERFAMILY ARM repeat 7 878 IPR016024 -
Sto10g0046 1037 Pfam HEAT-like repeat 405 458 - -
Sto10g0046 1037 PANTHER TRANSPORTIN 1 ISOFORM 1 7 894 - -
Sto10g0046 1037 Pfam Importin-beta N-terminal domain 36 102 IPR001494 GO:0006886|GO:0031267
Sto10g0046 1037 ProSiteProfiles Importin-beta N-terminal domain profile. 35 103 IPR001494 GO:0006886|GO:0031267
Sto10g0046 1037 SMART IBN_N_2 35 103 IPR001494 GO:0006886|GO:0031267
Sto10g0046 1037 PANTHER IMPORTIN BETA 7 894 IPR040122 GO:0006606
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0046 Sto-Chr10 379954 393447 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0046 K18752 - gmx:100792702 1550.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0046 10 379954 393447 Sto10g0046 10 379954 393447 ECH