Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0043 ATGGAGAGCTTAATCCACCTCTTAGTGACAGTTTTTCTGACGGGAATTGCCAGTTTCATAGTGATTCCGGCAATCACGGATGTGACCATGTCTGCACTTTGCCCAGCTCAAGATCAATGCTCCCTCGCCATTTACCTCACCGGATTCCAGCAggctGTAACGGGAATGGGAGCCGTGGTGATGACGCCGTTAATAGGGAACTTGTCGGACGAGTACGGCAGGAAAGCTTTGCTAACGCTTCCCCTAACGCTGTGCCTCATTCCTATGGTCATATTGGCGTATAGCAGGGATACCTATTACTTCTACGCATACTATGCTGTTAGAACTCTTACTGCCATGGTTGGGGAAGGCTGCGTTAACTGCCTCACACTTGCATATGTGGCTGACAAGGTTGGAGAGAGTAAAAGAGCATCTGCATTCGGAATCCTTGCTGGTGTAGCCTCTGCATCATTTGTCTGTGGGACCTTACTTGCACGTTTCCTTTCCACTGCTTTAACATTTCAGgtCTCTGCATTCTTGTCCATGATTGCAGTGGTGTACATGAGAATTTTTCTAGAGGAAAGTCTCCCTAGTAGAGGTGCTCATCTGACGCAGCCTATGTTGAAACACAGCAACGTTAAAGATGAATGTGAGATAAGTGATTCACCGCGCAAAACAAACGGAATATTGAAGAGACTTCCTTCCGTGACAGATTTAATTTGCTTGCTCAAGAGTAGGCCAACATTTTTACAAGCAGCTGTCGTTTTGTTCTTCAATAGTCTCGCAGATGGTGGGATGATGACTTCATTGCTGTACTACTTGAAGGCCCGTTTTCAATTCAGTAAGAACCAATATGCCGATTTAATGCTAATTGGTGGGATTGCTGGTACTCTTGCACAACTGCTTTTCATGCCCATACTAGTACCTGCTCTAGGAGAGGAGAAATTGCTTTCAACAGGTCTCTTTGTTGGCTGCATAAGTGTTCCTTATGCCATAGCAGTGTGCTCTGTTTTGGGAGTTTTTGTTCGCCCAAGTATATCGAGCATTGCATCCAAACAAGTTGGACCAACCGAACAGGGAATGGTTCAAGGATCTCTTTCAGGAATAGGTTCATTCGCCAACATCATTTCTCCATTAATTTTCAGCCCACTGACAGCCTTGTTCCTGTCGGACAAAGCACCGTTTTATTTCCCTGGCTTCAGCATAATGTGCGTTGGTCTAGCACTGATGATTGCTTTTGTTCAGAGTATAATGATCCGACCTGTTCCTTCTGATGTCCACACCAAAAATAGGAACAGTGACTTGGTCTGA 1290 0.4504 MESLIHLLVTVFLTGIASFIVIPAITDVTMSALCPAQDQCSLAIYLTGFQQAVTGMGAVVMTPLIGNLSDEYGRKALLTLPLTLCLIPMVILAYSRDTYYFYAYYAVRTLTAMVGEGCVNCLTLAYVADKVGESKRASAFGILAGVASASFVCGTLLARFLSTALTFQVSAFLSMIAVVYMRIFLEESLPSRGAHLTQPMLKHSNVKDECEISDSPRKTNGILKRLPSVTDLICLLKSRPTFLQAAVVLFFNSLADGGMMTSLLYYLKARFQFSKNQYADLMLIGGIAGTLAQLLFMPILVPALGEEKLLSTGLFVGCISVPYAIAVCSVLGVFVRPSISSIASKQVGPTEQGMVQGSLSGIGSFANIISPLIFSPLTALFLSDKAPFYFPGFSIMCVGLALMIAFVQSIMIRPVPSDVHTKNRNSDLV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0043 429 Gene3D MFS general substrate transporter like domains 2 409 IPR036259 -
Sto10g0043 429 Pfam Major Facilitator Superfamily 7 371 IPR011701 GO:0022857|GO:0055085
Sto10g0043 429 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 3 422 - -
Sto10g0043 429 ProSiteProfiles Major facilitator superfamily (MFS) profile. 3 429 IPR020846 GO:0022857
Sto10g0043 429 SUPERFAMILY MFS general substrate transporter 5 407 IPR036259 -
Sto10g0043 429 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 3 422 - -
Sto10g0043 429 CDD MFS_SLC46_TetA_like 7 409 - -
Sto10g0043 429 PRINTS Tetracycline resistance protein signature 47 66 IPR001958 GO:0022857
Sto10g0043 429 PRINTS Tetracycline resistance protein signature 140 162 IPR001958 GO:0022857
Sto10g0043 429 PRINTS Tetracycline resistance protein signature 355 378 IPR001958 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0043 Sto-Chr10 366385 371063 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0043 4 426 Organic Solute Cotransporters AT2G16990 45.824 1.39e-118 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0043 - - gmx:100803054 577.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0043 10 366385 371063 Sto10g0043 10 366385 371063 ECH