Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0012 ATGGCATCAGGTCAGAACCAAGCGCCTAATGTCGATCTCTTCGATGCTTATTTTCGACGTGCGGATTTGGATCGAGACGGCCGTATTAGCGGTGCAGAAGCTGTCGCCTTTTTCCAAGGCTCTGGTTTGTCCAAGCAGGTTCTCGCGCAGATTTGGGCTTTTGCAAACCAGAGTCAAAGTGGCTTCCTTGGCCGGGCAGAGTTTTACAATGCTCTTAAACTTGTCACAGTGGCACAAAGTAAGCGAGAACTGACCCCTGACATAGTTAAAGCAGCATTGTATGGTCCAGCTGCATCTAAGATACCTGCACCTCAAATTAATTTCACTTCCACGGTTGCACCTCAGTTAAATTCTTCAGCAGCTGCACCTCCACCTGCATCTGCACCTCCAGCACAGATAGGCTCTGTTAGTTCTGTGTCCTACCAAAATATTGGATTAAGGGGGACATTTCCAAATTTAATTGGAAACCAGCAGAACTTTCCTTCTCTGGAAAGTCATTTAGTGAAGCCTCCCCAACAAACTTCTACATCTGGTTCGAATTTAGCACCTGGTATTGCCACTCAAGGGTTCTCTGTAGGGGTGGCTGTTGGTGGAGCTCAAGCTGAAAGCCCCAGCTTTTCAAGTGATGGGATCAGTGGCAAAATAGTTGGAACTCCAGCAGTAAGGTCCTCCCAAGTAGGAGCTGATGGAATTAATTCTTCATCAACTCAGGATGGGTTTGGGCTTTCAGCCTCCAGACCAAATGCTGCACTGCCACCTAGGAAATTCCCTGTTTCTGACACAAAATCATCTGAACAAGTGGTTAAGGATTCTAGATCAGTGGATGCTTCAGGAAATGGTTCTTCTGATTCATTTTTTGGTGGGGATGTGTTCTCTGCTACCTCATCTCAGCCAAATCAATATTCTTCCCCACAAGGATTTTCTTCAGGCAGTCCACTGCTTCCATCAGCTATTCCGGTATCTGGTATGAATCCGAATTCTATAAAGACAAGCACCCCTGATTCTTTTCAGAGCTCCCTTGCAACACAGCCTGTTAGTGCACAGCTTCAGCAAGCCCATCCTCTGGTAAAACAAAATCAGCATGCCTCAATTCAGACACGTAACATGTTGAATCCATCTGGACATCCAGTGGGATTGCAGAATTCGGCTTCCAGTCAGCCTCAGTCTCCTTGGCCAAGGATGACACAAACTGATGTTCAGAAATATACAAAAGTATTTGTGGAAGTAGACACAGACAAAGATGGGAAAATTACTGGGGAACAAGCACGAAACTTGTTTCTTAGTTGGAGATTGCCACGAGAGGTTTTAAAGCAGGTCTGGGACCTATCTGATCAAGATAATGATAGCATGCTTTCTCTTAGGGAGTTTTGTATTGCATTGTACTTAATGGAGCGATACAGGGAAGGACGTGTTCTTCCGGCAGTACTTCCTAGTAACATTATGCTTGATTTACCATCTACCTGTCAACCTGCAACTCACTACAGTGCTGCATCTTGGGGAAGTTCATCAGGTTTTCAACAACAGCAAGGGATGACTGGTTCTGGGTCTCGACCTGTGAACCCTGCTGCAAGTCGGCCTCCAAGGCCTGCTTCTATCCCTCAATCTGAGGAAGGACCACAGAACAAGCAGCAAAAGTCCAGAGTGCCAGTCTTGGAGAAGCACCTCATAAGTCAGCTTAGTTCAGATGAGCAGAATTCAATTAATTCGAAGTTTCAAGATGCAACAGAAGCAGATAAGAAGGTGGAAGAACTTGAGAAAGAAATATTGGAGTCCAGAGAGAAAATAGAATTCTACCATAACAAAATGCAGGAACTTTCTTCGGTTTGGGTTCTCTGTTTTCGTTCTccattttcttcctcttcttcattGGGTTTAGACTTCAATAGGTTGCAGCGTTTCTCATTCGTGGTTCTGTTCTTCTCCGTGCATTCGCGTCTCTCGGTTTGGGCACAGAGAGGTGGAGAAGTAAAAGGGTTATTCATCTTTGCGTTCGCTTCTCTTTGTCTCGCTGATAGGGTTTTCCCTGCGCTGCTGCCGGAGCCGTTGGGTCTCACCGTCGAGACCGTCGCCGTGGACTCCTTCGTCGGTATAGGTGACGGTGGTTTCCGACGCCGGAAGGTTCGTCGGAAGCCTTTGTTCGCGATTTTTCAACCTGTTTTGCTATGGGAAGGATGTAAGAGCAACGAAGACGGGGATAAGCGCAATAATATCAGGGTGCATCTTGGGCCAAAATCTAAGGAGCAAGGAAACAATTCTACATTCAGAAGAGTCCTCAGAATATTTTTAGAAGATGGGGGGAAGAGGTGGGTTCAATGGGTATTAGAAAGACAAGATGTAGCCGAGGCTACAAAGCAGTGCATTGTTGCTAGGCAACTTACTACAGTTGCGTGGAGCCATGTTCAACAAGGATCTAATACCCAAAAGACTGTTGTGGAGACCGATTCTTTGCAACGTGATGTTGGTGTTCAAACTGAAGAGGCTGAGATTGTTATATTAGGAGACAATGTCAGCAACATAGAAAGTTCCCTCTGGCTATTTGAGATGCTAGAAATCTCCACAGCACTTTCCTAG 2571 0.4547 MASGQNQAPNVDLFDAYFRRADLDRDGRISGAEAVAFFQGSGLSKQVLAQIWAFANQSQSGFLGRAEFYNALKLVTVAQSKRELTPDIVKAALYGPAASKIPAPQINFTSTVAPQLNSSAAAPPPASAPPAQIGSVSSVSYQNIGLRGTFPNLIGNQQNFPSLESHLVKPPQQTSTSGSNLAPGIATQGFSVGVAVGGAQAESPSFSSDGISGKIVGTPAVRSSQVGADGINSSSTQDGFGLSASRPNAALPPRKFPVSDTKSSEQVVKDSRSVDASGNGSSDSFFGGDVFSATSSQPNQYSSPQGFSSGSPLLPSAIPVSGMNPNSIKTSTPDSFQSSLATQPVSAQLQQAHPLVKQNQHASIQTRNMLNPSGHPVGLQNSASSQPQSPWPRMTQTDVQKYTKVFVEVDTDKDGKITGEQARNLFLSWRLPREVLKQVWDLSDQDNDSMLSLREFCIALYLMERYREGRVLPAVLPSNIMLDLPSTCQPATHYSAASWGSSSGFQQQQGMTGSGSRPVNPAASRPPRPASIPQSEEGPQNKQQKSRVPVLEKHLISQLSSDEQNSINSKFQDATEADKKVEELEKEILESREKIEFYHNKMQELSSVWVLCFRSPFSSSSSLGLDFNRLQRFSFVVLFFSVHSRLSVWAQRGGEVKGLFIFAFASLCLADRVFPALLPEPLGLTVETVAVDSFVGIGDGGFRRRKVRRKPLFAIFQPVLLWEGCKSNEDGDKRNNIRVHLGPKSKEQGNNSTFRRVLRIFLEDGGKRWVQWVLERQDVAEATKQCIVARQLTTVAWSHVQQGSNTQKTVVETDSLQRDVGVQTEEAEIVILGDNVSNIESSLWLFEMLEISTALS 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0012 856 MobiDBLite consensus disorder prediction 557 572 - -
Sto10g0012 856 Gene3D - 8 100 - -
Sto10g0012 856 ProSiteProfiles EF-hand calcium-binding domain profile. 9 44 IPR002048 GO:0005509
Sto10g0012 856 Gene3D - 379 483 - -
Sto10g0012 856 MobiDBLite consensus disorder prediction 259 340 - -
Sto10g0012 856 MobiDBLite consensus disorder prediction 224 340 - -
Sto10g0012 856 PANTHER EH DOMAIN 7 605 - -
Sto10g0012 856 MobiDBLite consensus disorder prediction 225 243 - -
Sto10g0012 856 Pfam EF hand 15 31 IPR002048 GO:0005509
Sto10g0012 856 SMART efh_1 401 429 IPR002048 GO:0005509
Sto10g0012 856 SMART efh_1 13 41 IPR002048 GO:0005509
Sto10g0012 856 SMART efh_1 47 75 IPR002048 GO:0005509
Sto10g0012 856 SMART efh_1 435 463 IPR002048 GO:0005509
Sto10g0012 856 Coils Coil 567 601 - -
Sto10g0012 856 MobiDBLite consensus disorder prediction 493 519 - -
Sto10g0012 856 CDD EH 402 468 IPR000261 GO:0005515
Sto10g0012 856 SUPERFAMILY EF-hand 387 480 IPR011992 -
Sto10g0012 856 SMART eh_3 6 98 IPR000261 GO:0005515
Sto10g0012 856 SMART eh_3 390 486 IPR000261 GO:0005515
Sto10g0012 856 MobiDBLite consensus disorder prediction 493 578 - -
Sto10g0012 856 MobiDBLite consensus disorder prediction 371 394 - -
Sto10g0012 856 ProSiteProfiles EH domain profile. 398 481 IPR000261 GO:0005515
Sto10g0012 856 PANTHER CALCIUM-BINDING EF HAND FAMILY PROTEIN 7 605 - -
Sto10g0012 856 ProSiteProfiles EH domain profile. 10 100 IPR000261 GO:0005515
Sto10g0012 856 Pfam Cytoskeletal-regulatory complex EF hand 392 463 IPR000261 GO:0005515
Sto10g0012 856 ProSiteProfiles EF-hand calcium-binding domain profile. 431 466 IPR002048 GO:0005509
Sto10g0012 856 CDD EH 14 80 IPR000261 GO:0005515
Sto10g0012 856 SUPERFAMILY EF-hand 10 93 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0012 Sto-Chr10 101845 109816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0012 12 612 EF-hand Containing Proteins AT1G21630 43.106 2.93e-136 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0012 K12472 - gsj:114385464 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0012 10 101845 109816 Sto10g0012 10 101845 109816 ECH