Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1905 ATGTGGACAAATGTTTTCAAAATCGGAAGTCTGCATCAGATATCATGGTTTCAGTTTCTTCCTCACGAACCTGACCTGAACCCTCTACCTGACAAAAGCGTAAAAGTGGACCAAAAGGATGCTGCAATGTTACTGGTGCTTTCATCACATCTGCAACTTCAGAAGGAGGGATTTCTCAGCACATGGACCAATTCCTTTGTTGGACCTTGGGATCCATCCCAGGGAATGCATAATCCGGACGAAAAGATTAAGCTATGGCTTTTCTTTCCAGGGCGTCGTTCATCAGTTGATGAGACTGCTCAGCCAGCAGTATCCAGATTAAGAGttGTTGCTTCTGGGCTTTGGTTGGCTCCTGGTGATTCAGAAGAAGTTGCAGCTGCTCTTTCTCAGGCTTTGAGGAATTGTATAGAAAGAGCTTTGCTTGGGCTTTATTACATGAGatttggagatgtattttcaaAGTTTCATCAATTTCAAAGAGAAGAACTGTTCAGAAGAGGACAGCCTGCAGTTGAGTTTGTCTTTGCTGCAACCGAGGAGGCAATATTCATACATTCCATAGTGTCCTCAAAGCATATCCGGATGCTTTCCACAGGTGATCTGGAAAAAGTATTAAAACATTCTACAGAGTCGACATATAGACTTCCAGTGATTGTTTCTCCTCATGGAATTCGTGGCAGCTTGACTGGTTGTTCTCCTAGTGATCTTGTCAAGCAAAGCTATTTCAGTTCTACCAAATTTAGGGTGTCCAATGGAATTATAGGTCTCCCGTATCATGTTTCCCAGGGTGTTGGTTGCCAGCTGAGGGGGCAGAATTGTTATGTTGAAGTCAGTCTTGGCTTCCCTAGATCTGGAACTGATAACACATTGCAGCCAAACAAAATTAGTGTCAGGAATTTACCCAAACTTCATGTTTCTGAATCTCCTATTGCGGGACGAAGTGATCACAAGGGATCACCAGATCATTTGTTGGATTATGAGAAAACATTTCTCTATCCAGCTGAGGCCGTGCTTGTGCCAGTTTTACAAACATCATTAGCAAGGTCTTCCTTGAGaagATTTTGGCTGCAGAATTGGATGGGACCATCCCTGCCTGGTTCCTCTTCCTTTATTCACTGTGCTGGTAATGTGGATTGTACTGAAGATCCGTGGACTGAAATCAATGGAACCCGCGTGCAAAATAGTTATGATAGTAGTAGCAATAGCAATAGTAGCAGTATTAGTAGCTTAAGTGCCAGCTCTAGTGATAGTGATTACAAGACTACAGGACCAAGTGAACTAGAAGCAGATGCTGATTCTTTAACGTGTAGACAGTCTATGGTATCTTCTGGTGATCAGTTGGAAAGTGATGGCCCCAAATTGGGCTCTAAGCGGTCTCGAACAGGAGTGACAGAGTCTTTAAGTACAGCTACAAACATTCCTGTGCAAGACGTTTACATGTCTGATTTTGGTTCCATGGAAGTGAACAATTCAGCCATTACAGGTGTAGGAAATGAGCCAATTGGGTCTTACTGGGACTGGGATGATGATGACAGGGGCATGGAAATGGATATTCAAGCCCTTCTATCGGAGTTTGGTGACTTTGGTGACTTCTTCGAAAATGATGTTTTGCCTTTTGGAGAGCCCCCAGGAACTGCGGAATCTCAGGCACTAGTGTTTTCTGCCCCAGATTGTGGAGATGTCAACAGCAGTCCAGGTGGTGTGATAGATGGTTCAGATCAAATACTTTTGCCTGTTGGGTTTCCTTCCTTTGAGAGCTTTAACCCCCCTCCTTCAGCTGCCATGGAGGAATGTCTTAACAAAAGTCAAGATAACTTGAATAACTCCATGTCTTTGGGTCCAACCAATCAAACTCAAATGTTGTATACGAGGGAGTTTGATCATATTATGAAAGCTGAAGCAATGATGACATTTGCTCCTGAATTTGGAGCAGTTGAGACCCCTACTTGTGAGTTGTCCACAACATTATTCAGAAGCCCATATTTTCCAAAATCTCGAAAAGCAGAGAGTTCAAATTCAAGTTCAAACAATTACTTATACGGGGCAGCACCACCCTCTTCTCCCTGCACTGAAGGATCAGAGGGGAAGAATGGAATGGCTGTCAATACAAAAACAGGTTCCGGAAAACATGATGCAAGTATGAGTCTccactcaaaaaattattatacttttgtggagagtaggaaagaaaaaaatgataaaaattctGTCACATGTAATGATAACAGCATTGCTAAATCTGAGGGGATACTTCCACTCTCAAACATTGGTTCTAATGCTGTTGTCAAGTCTGCCCTAAGGAAGACGACTGAAGGCACTCATGAAGCAGAGCATTTCGTTCTATCTGCAAAAACTTTGTTGGCAACTGATATCACATGTGTTATGTTGCAAGCTTCCATGTGCAGGTTACGCCATATTCTCTTATCTTCAGGTAACGTAATGCCTGTTGGTTTGAGTAGGTCAACTGGGGTTTCATTTTTGAATCAGTTTCCTAGTGACCCAAGTACGACCACAGACAACATATCTGGCAAGTATGatgtgaagaagaaagaaaatataccGATTAGAATTGCAGGTGATATTGATGGGGGAATGCTTGATGGGCACCTTAATGCCCCTGTTGGTGTTTGGCGTACATTAGGAGCTTCAAAAGTTGTAAAACCTTCTAATTCACCTAACATGGAAGTTGGTCCTTCCTTTTCTCATAATTCTTTCAATGAAGAAGGTATCCTTTCTTATGGTCAAAGGAAACCGCTTCAGGAGCTTCTTGACGGGATAGCATTGCTTGTCCAACAAGCTATTTCCTTTGTTGATCTGGCCTTGGATGCGGATTGTGGTGATGGTCCTTATGGTTTGCTTGCACTACAAGAACAGTGGAGGCATGGATTTTGTTGCGGGCCTTCCATGGTCCATGCTGGCTGTGGGGGAACTCTTGCCTCTTCTCATTCACTGGACATTGCTGGCTTGGAGTTAGTGGATCCACTTTCTGCTGATGTTCATGCATCCACTGTCATCAGTTTGCTGCAGTCTGACATAAAAACAGCTTTGAAATCTGCTTTTTCCAATTTGGAAGGGCCATTAACTGTAACTGAATGGTGCAAAGGACGCAATCAATTGGTTGATACTGGAAGCATAGTTGATGGAGTTTCTGCTGAATCCAGCATTAATGAATGTAGGGATTCTTCAGAACCAATGAGTCCATCCCAGTCATCTGTTGGTGGATCATCCAGTATTAAGGTTTCCAGCATGATGGATAGTGCTAAGGTGGATGAGACTTCTCAAAGGAGATCGAGCCAAGATTTGTGCAGTACAGAGTCAGAGTTGCAAACATGTTCCCGGCTAAAGCCTACTCTCATTGCTCTTCCCTTTCCTTCTATACTTGTAGGGTATCAGGATGATTGGCTCAAGACATCAGCAAACTCTTTGCAGCACTGGGAAAAGGCTCCTCTAGAACCCTATGCTCTACAGAAACCTATTACATATCATGTTGTATGTCCTGACATTGATCCCCTTACTTCTGCTGCTGCTGatttttttcaacaactagGAACAGtgtATGAGACATGCAAGCTAGGTACTCATTCACCTCAAGGCTTGGGGAATCAGATGGAGATAGAGTCTGCAAAGTTGTCATCTTGTGGTTTTGTTTTACTTGATTGCCCCCAATCAATGAAGATTGAGAGCAGCAATGCATCTCTTGTTGGTTCagtaagtgattattttttatctttatccaaTGGTTGGGACCTGACTAGTTATCTCAAGTCTCTTTCGAAGGCACTTAGAGGTTTGAAAATTGGTTCTTGTTTTTCTACAAACCCCAGCGAAGGAAGTAACAGTTCGTGCTTGGTAATCTATGTGGTGTGCCCGTTTCCTGATCCCACTGCAATTTTGCAAACTGTAATTGAATCTTCTGTTGCCATTGGATCGGTTGTCCAACAGTCAGATAGAGAGAGGAGATCTAGCTTGCATAGTCAGGTTGCGAAGGCATTAAGTGGCTTGGCTACTGTTGACGAAGCTTCAGCGTCTAATATCCTTGTGCTTTCTGGGTTTAGTATTCCAAAATTGGTCTTGCAGATAGTTACAGTGGATGCCATTTTCAGAGTCACAAGCCCATCTGTTAGTGAGCTTGTCATTTTAAAAGAGACTGCCTTTACTGTATACAGCAAGGCTCGTCGCATTTCTCGTGGAATCTCTAGTGATTTTGCTCAATCGGCATTTTCTAGTAGATCTCATTCTGTTTTGACACAAATGCCTTCTCCCATCTCTGGGATGTGGAAAGACTGTGTAGGTTCTCGAATGGCAGGACATTCTCTTCCTAGAGAGGGTGACATTGATGCTAGCTTGAGGCCTGGTACTTGGGATAATTCTTGGCAACCAACAAGGACTGGGGGGTTAAGCTGTGATCCAAGTAGAACTGGGGATTTTTTTCTTCATGATGAAATTCGTTACATGTTTGAACCCCTTTTTATTCTTGCAGAACCAGGTTCTCCTGAAAATGGTATTTCAGTTATTGGTAGCCCCACTTCAGAATCTTCCAAGGCATTGGCAGATGACAGTAGTGGTAACTATGTACAGAGTACGAGTACAGCAGGAAGTGTGGAGTCTGCTTCAAGCACTGATGGATCTGGGTCCGATCCGAAGACTCCTCCAAGCCTACATTGTTGCTATGGATGGACAGAGGACTGGCGTTGGCTCGTATGCATCTGGACAGATTCAAGGGGAGAATTGCTGGACTGCAATATTTTCCCCTTTGGTGGAATAAGCAGTAGGCAGGATACAAAGGGTCTGCAGTGCCTATTTGTTCAAATTCTTCAGCAAGGTTGTCTGATACTTCAATCTTGTGATCCTGGCCTTGCAAAGCCTCGAGATTTTGTGATAGCACGCATTGGAGGTTTTTATGAGCTTGAGTACCTTGAGTGGCAGAAAGCCATTTATTCAGTTGGTGTATCTGAGATGAAGAGATGGCCTCTGCAATTGCGGAAATCTATGTGTGATGGGATGTCTGCAACTAGTAATGGTTCTTCTTTGCAACAACCAGATATGAGTTTGATCCCAGAAAGAACTCTTCCTTCCTCACCTAGTCCTTTGTACAGCCCTCATAGCAAATCCACTGGTTTTATGAAAGGCAGTTTAGGACAACCTACTGCAAGAAAGCAGCTTATGGGTGGACATTCCATGGTTGACAATTCAAGGGGTTTGCTTCATTGGGCACAAAGCATTAGTTTTGTTGCAGTTTCCATGGACCATACATTACAACTAGTTCTCCCAGCAGATTCGTCTACTCCTGGTTACATAGAGGGTTTCACTCCAGTGAAGTCTCTTGGTTCTACGTCTTCCGCATATATTCTAATTCCTTCTCCCAGCATGCGGTTCCTTCCTCCAACAGTTCTTCAACTCCCCACATGCCTCACAGCAGAGTCGCCCCCACTAGCTCATCTGCTTCACAGCAAGGGTTCTGCTCTTCCTCTCTCTACTGGATTTGTGGTTTCAAAAGCAGTACCTTCCATGAGGAAGGACTATAGAAGCAACCTGAAAGAAGAATGGCCATCTATACTTTCAGTGAGCCTCATTGATTATTATGGAGGTGCTAACATCCCCCAAGAGAAGATTGTCCGAGGAATTAACAAGCAAGGTGGTAGAAATTTAAGCTGGGAAGCTaaagattttgaaattgagACCCACTTGGTTCTGGAGTCTCTTGCAGCAGAGCTTCATGCCTTGTCATGGATGACGGTGAGCCCCACATACTTAGAGCGGCGAACAGCACTTCCCTTCCACTGTGACATGGTTCTAAGACTAAGAAGACTTCTTCACTTTGCTGATAAAGAGCTCTCCAAGCAGTCAGAGAAATCTTGA 5859 0.427 MWTNVFKIGSLHQISWFQFLPHEPDLNPLPDKSVKVDQKDAAMLLVLSSHLQLQKEGFLSTWTNSFVGPWDPSQGMHNPDEKIKLWLFFPGRRSSVDETAQPAVSRLRVVASGLWLAPGDSEEVAAALSQALRNCIERALLGLYYMRFGDVFSKFHQFQREELFRRGQPAVEFVFAATEEAIFIHSIVSSKHIRMLSTGDLEKVLKHSTESTYRLPVIVSPHGIRGSLTGCSPSDLVKQSYFSSTKFRVSNGIIGLPYHVSQGVGCQLRGQNCYVEVSLGFPRSGTDNTLQPNKISVRNLPKLHVSESPIAGRSDHKGSPDHLLDYEKTFLYPAEAVLVPVLQTSLARSSLRRFWLQNWMGPSLPGSSSFIHCAGNVDCTEDPWTEINGTRVQNSYDSSSNSNSSSISSLSASSSDSDYKTTGPSELEADADSLTCRQSMVSSGDQLESDGPKLGSKRSRTGVTESLSTATNIPVQDVYMSDFGSMEVNNSAITGVGNEPIGSYWDWDDDDRGMEMDIQALLSEFGDFGDFFENDVLPFGEPPGTAESQALVFSAPDCGDVNSSPGGVIDGSDQILLPVGFPSFESFNPPPSAAMEECLNKSQDNLNNSMSLGPTNQTQMLYTREFDHIMKAEAMMTFAPEFGAVETPTCELSTTLFRSPYFPKSRKAESSNSSSNNYLYGAAPPSSPCTEGSEGKNGMAVNTKTGSGKHDASMSLHSKNYYTFVESRKEKNDKNSVTCNDNSIAKSEGILPLSNIGSNAVVKSALRKTTEGTHEAEHFVLSAKTLLATDITCVMLQASMCRLRHILLSSGNVMPVGLSRSTGVSFLNQFPSDPSTTTDNISGKYDVKKKENIPIRIAGDIDGGMLDGHLNAPVGVWRTLGASKVVKPSNSPNMEVGPSFSHNSFNEEGILSYGQRKPLQELLDGIALLVQQAISFVDLALDADCGDGPYGLLALQEQWRHGFCCGPSMVHAGCGGTLASSHSLDIAGLELVDPLSADVHASTVISLLQSDIKTALKSAFSNLEGPLTVTEWCKGRNQLVDTGSIVDGVSAESSINECRDSSEPMSPSQSSVGGSSSIKVSSMMDSAKVDETSQRRSSQDLCSTESELQTCSRLKPTLIALPFPSILVGYQDDWLKTSANSLQHWEKAPLEPYALQKPITYHVVCPDIDPLTSAAADFFQQLGTVYETCKLGTHSPQGLGNQMEIESAKLSSCGFVLLDCPQSMKIESSNASLVGSVSDYFLSLSNGWDLTSYLKSLSKALRGLKIGSCFSTNPSEGSNSSCLVIYVVCPFPDPTAILQTVIESSVAIGSVVQQSDRERRSSLHSQVAKALSGLATVDEASASNILVLSGFSIPKLVLQIVTVDAIFRVTSPSVSELVILKETAFTVYSKARRISRGISSDFAQSAFSSRSHSVLTQMPSPISGMWKDCVGSRMAGHSLPREGDIDASLRPGTWDNSWQPTRTGGLSCDPSRTGDFFLHDEIRYMFEPLFILAEPGSPENGISVIGSPTSESSKALADDSSGNYVQSTSTAGSVESASSTDGSGSDPKTPPSLHCCYGWTEDWRWLVCIWTDSRGELLDCNIFPFGGISSRQDTKGLQCLFVQILQQGCLILQSCDPGLAKPRDFVIARIGGFYELEYLEWQKAIYSVGVSEMKRWPLQLRKSMCDGMSATSNGSSLQQPDMSLIPERTLPSSPSPLYSPHSKSTGFMKGSLGQPTARKQLMGGHSMVDNSRGLLHWAQSISFVAVSMDHTLQLVLPADSSTPGYIEGFTPVKSLGSTSSAYILIPSPSMRFLPPTVLQLPTCLTAESPPLAHLLHSKGSALPLSTGFVVSKAVPSMRKDYRSNLKEEWPSILSVSLIDYYGGANIPQEKIVRGINKQGGRNLSWEAKDFEIETHLVLESLAAELHALSWMTVSPTYLERRTALPFHCDMVLRLRRLLHFADKELSKQSEKS 1952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1905 1952 MobiDBLite consensus disorder prediction 390 465 - -
Ssu9g1905 1952 Pfam Mediator complex subunit 13 N-terminal 2 340 IPR021643 -
Ssu9g1905 1952 Pfam Mediator complex subunit 13 C-terminal domain 1551 1931 IPR009401 GO:0003712|GO:0006357|GO:0016592
Ssu9g1905 1952 MobiDBLite consensus disorder prediction 663 683 - -
Ssu9g1905 1952 MobiDBLite consensus disorder prediction 1083 1102 - -
Ssu9g1905 1952 MobiDBLite consensus disorder prediction 1056 1078 - -
Ssu9g1905 1952 MobiDBLite consensus disorder prediction 1502 1547 - -
Ssu9g1905 1952 Pfam MID domain of medPIWI 1267 1393 IPR041285 -
Ssu9g1905 1952 Pfam MID domain of medPIWI 1157 1272 IPR041285 -
Ssu9g1905 1952 MobiDBLite consensus disorder prediction 1441 1465 - -
Ssu9g1905 1952 MobiDBLite consensus disorder prediction 1501 1550 - -
Ssu9g1905 1952 MobiDBLite consensus disorder prediction 390 422 - -
Ssu9g1905 1952 MobiDBLite consensus disorder prediction 690 714 - -
Ssu9g1905 1952 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 1 1945 - -
Ssu9g1905 1952 MobiDBLite consensus disorder prediction 663 714 - -
Ssu9g1905 1952 PANTHER RAG1-ACTIVATING PROTEIN 1 1 1945 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1905 K15164 - gmx:100782017 3598.91