Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1902 atgggttgTAGGGTGATGTTAGCGTTGATGCTATGCCTATTGGCTGCGGCAGTGCGAGGTGAAGACCCATACGTGTATTACACATGGAACGTCAGCTACGGCACGATTTCTCCTCTAGGAGTGCCACAGCAGGGTATTCTTATCAACGGGCAATTCCCCGGACCCGAAATAAACTGcaccagcaacaacaacatTGTGGTGAATGTGTTCAACAACCTTGATGAGCCATTCCTTTTGACTTGGCATGGCGTTCAACACAGGAAGAACTCGTGGCAAGATGGTACATTGGGAACATCATGCCCCATCGCTCCTGGTACAAACTACACATACCGCTTTCAGGTGAAGGATCAAATTGGAAGTTTCTTCTACTATCCCACCACAGGATTGCACAGGGCAGCTGGCGGTTTCGGTGGCCTTAGGATTTTCAGCCGTTTGTTGATTCCTGTCCCATACGCGGACCCCGAGGATGAGTACTGGGTTCTGATGGGTGACTGGTACACCAAGAGTCACACCACGTTGAAGAAGTTCTTGGATAGCGGTCGCTCTCTTGGGAAGCCCGATGGCGTGCTCATCAATGGAAAAACTGCCAAGGGCGATGGTAGTGACAAACCACTCTACACCATGAAGCCTGGCAAGACCTACAAGTACAGACTCTGCAACGTGGGTCTCAAGGGCGCCCTCAACTTCAGGATCCAAGGCCACCCCATGAAGCTTGTCGAGATGGAAGGCTCCCATGTCGTGCAAAACATCTACGACTCTCTCGACGTCCATGTTGGGCAATGCTACACTGTCCTCGTCACCGCCGACCAGGCCCCCAAGGACTATTACATGGTCGCCTCCACGCGCTTCACCAATTCCGTTCCTTCCGTTGGAACCATCACCGCCAGCGCCGCAAGGCCTAACCCTCAGGGCTCTTACCATTATGGTCAGATCAACATCACTCGCACGATCAAGCTCGTCAACTCCGTCAGCAGAGCTCAAGGTCTCCGTTATGCCATTAATGGTGTCTCACACGTAGATGCTGATACTCCTCTCAAGCTTGCTGAGTACTACGGAGTTGCTAACAAGGTTTTCAAGTACAACATCATCTCTGATGAGCCCCCCGTCGATCAGAAAACCATCGTCAAAGCACCCAATGTCATCACAGCCACATTCCGCAACTTCATCGAGATAATCTTTGAGAACCACGGAAAAACTGTTCAGTCATACAATTTGGACGGTTACTCATTCTTTACAGTCGCCATAGAGCCAGGCAGATGGAGCCCagagaaaaggaagaactaTAACCTTCTTGATGCCGTGAGCAGACACACTGTTCAAGTCTTCCCCAAATCTTGGGCCGCCATCATGTTGACGTTCGACAATGCTGGAATGTGGAACTTGAGATCGGAACAGGCTGAGAATCGCTACCTGGGCCAACAACTCTATATGAGCGTTTTGTCCCCTGAACGTTCCCTCAGGGATGAGTACAACCTCCCGGATGCCCAGCTTATTTGCGGAATGGTCAAGGATATGCCCAAGCCAAAACCATACTCCATGTAG 1542 0.4961 MGCRVMLALMLCLLAAAVRGEDPYVYYTWNVSYGTISPLGVPQQGILINGQFPGPEINCTSNNNIVVNVFNNLDEPFLLTWHGVQHRKNSWQDGTLGTSCPIAPGTNYTYRFQVKDQIGSFFYYPTTGLHRAAGGFGGLRIFSRLLIPVPYADPEDEYWVLMGDWYTKSHTTLKKFLDSGRSLGKPDGVLINGKTAKGDGSDKPLYTMKPGKTYKYRLCNVGLKGALNFRIQGHPMKLVEMEGSHVVQNIYDSLDVHVGQCYTVLVTADQAPKDYYMVASTRFTNSVPSVGTITASAARPNPQGSYHYGQINITRTIKLVNSVSRAQGLRYAINGVSHVDADTPLKLAEYYGVANKVFKYNIISDEPPVDQKTIVKAPNVITATFRNFIEIIFENHGKTVQSYNLDGYSFFTVAIEPGRWSPEKRKNYNLLDAVSRHTVQVFPKSWAAIMLTFDNAGMWNLRSEQAENRYLGQQLYMSVLSPERSLRDEYNLPDAQLICGMVKDMPKPKPYSM 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1902 513 PANTHER MULTI-COPPER OXIDASE 4 287 IPR045087 -
Ssu9g1902 513 CDD CuRO_1_AAO_like_1 25 141 IPR034273 GO:0005507
Ssu9g1902 513 Gene3D - 14 142 IPR008972 -
Ssu9g1902 513 SUPERFAMILY Cupredoxins 327 499 IPR008972 -
Ssu9g1902 513 Pfam Multicopper oxidase 344 482 IPR011706 GO:0005507|GO:0016491
Ssu9g1902 513 SUPERFAMILY Cupredoxins 21 171 IPR008972 -
Ssu9g1902 513 Pfam Multicopper oxidase 157 290 IPR001117 -
Ssu9g1902 513 PANTHER MULTI-COPPER OXIDASE 293 504 IPR045087 -
Ssu9g1902 513 Pfam Multicopper oxidase 31 143 IPR011707 GO:0005507
Ssu9g1902 513 Gene3D - 313 506 IPR008972 -
Ssu9g1902 513 PANTHER L-ASCORBATE OXIDASE-LIKE PROTEIN 293 504 - -
Ssu9g1902 513 PANTHER L-ASCORBATE OXIDASE-LIKE PROTEIN 4 287 - -
Ssu9g1902 513 SUPERFAMILY Cupredoxins 153 288 IPR008972 -
Ssu9g1902 513 Gene3D - 150 312 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1902 Ssu-Chr9 56542979 56545173 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1902 K00423 - gmx:100812197 843.958