Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1901 ATGGGAAGGGTAATAATTGTGCTCTTGCTATGGCTGTCGGCCGGGACAATATTGTCGGTGGTCCGGGGTGAAGACCCTTATCTCTTCTTTACATGGAACGTTACCTACGGCACCGTCTCTCCATTGGGTATACCCCAGCAAGGCATTCTCATCAACGGCCAATTTCCAGGACCCAACATCAATTCCACCAGTAACAATAATCTAGTTGTCAATGTCTTCAATAATCTCGACGAGCCATTCCTTTTGACAtgGAATGGCATCCAACATAGAAAGAATTCGTGGCAAGACGGAGTTGCGGGAACTAACTGCCCCATTCCTCCAGGGACAAACTTCACGTACCATATCCAGGTGAAGGACCAGATAGGCAGTTACTTCTACTACCCGAGCACAGCCATGCACAGGGCAGCTGGTGGTTTTGGTGGCCTCCGTGTAAACAGTCGCTTGCTCATTCCTGTGCCTTACGCAGATCCCGAGGACGAATACACCGTTCTCATTGGTGACTGGTACACAAAGAGCCACACCATTCTGAAGAAGTTCTTGGATAGTGGGCGCGCCCTTGGCAGGCCCGAAGGTGTTCTCATCAACGGCAAAACAGCCAAAGGCGACGGAAAAGACGAGCCACTCTTCACCATGAAACCTGGAAAGACCTACAAATACAGAATATGCAACGTGGGCCTCAAGAATTCCCTCAACTTCAGGATCCAAGGCCATTCCATGAAGCTTGTCGAGATGGAAGGCTCCCACGTCGTGCAAAACAGCTACGACTCTCTTGACGTCCATGTAGGGGGGTGCTTCTCTGTCCTCGTTACGGCGGACAAGGTGCCAAAGGATTACTACATGGTGGCTTCCACGCGTTTCACCAAGACCGTTCTAACAGGTAAAGGCATCATCCGTTACACAAATGGTAAAGGTCCTGCCTCACCCGACATCCCTCCGGCTCCGGTTGGTTGGGCTTGGTCTCTCAACCAATTCCAATCCTTCCGATGGAACCTCACTGCCAGTGCCGCCAGGCCCAACCCTCAGGGTTCCTACAAATATGGTCATATCAACATTACCCGTACTCTCAAGCTCATCAACTCAGTTAGTAGGACAAAAGGCAAGCTCCGTTATGGCCTCAATGGTGTCTCACACGTCGACCCCGAAACTCCGGTCAAGCTAGCTGAATACTTTGGAGTTTCGGACAAGGTTTTCAAATATGATACTATCCCAGACAACCCTTCCCCTAACATTGGAACCACTCTACCCTTACAACCAAATGTCCTTAACTTTACCTATCGCAACTTCATCGAGATCATTTTTGAGAATCATGAAAAGTCAATGCAGTCATATCACTTGGATGGTTATTCGTTCTTCGCAGTCGGCATAGAGCCAGGCACGTGGACCCCAGAGAAGAGGAAGGGGTACAACCTTCTTGATGCCGTGAGCAGACACACAGTCCAGGTCTTCCCAAAATGTTGGGCCGCCATCATGTTGACATTCGACAATGCTGGAATGTGGAACCTAAGATCGGAGACTGCTGAAAATCGCTATCTTGGCCAACAGCTATACATTAGTGTTGTGTCCCCAGAGCGTTCTCTCAGAGACGAGTACTCTATCCCAGACAGCAGCTTGCTCTGCGGTCTTGTAAAGAATTTGCCAAAACCAGCACCATACTCCTAA 1659 0.4949 MGRVIIVLLLWLSAGTILSVVRGEDPYLFFTWNVTYGTVSPLGIPQQGILINGQFPGPNINSTSNNNLVVNVFNNLDEPFLLTWNGIQHRKNSWQDGVAGTNCPIPPGTNFTYHIQVKDQIGSYFYYPSTAMHRAAGGFGGLRVNSRLLIPVPYADPEDEYTVLIGDWYTKSHTILKKFLDSGRALGRPEGVLINGKTAKGDGKDEPLFTMKPGKTYKYRICNVGLKNSLNFRIQGHSMKLVEMEGSHVVQNSYDSLDVHVGGCFSVLVTADKVPKDYYMVASTRFTKTVLTGKGIIRYTNGKGPASPDIPPAPVGWAWSLNQFQSFRWNLTASAARPNPQGSYKYGHINITRTLKLINSVSRTKGKLRYGLNGVSHVDPETPVKLAEYFGVSDKVFKYDTIPDNPSPNIGTTLPLQPNVLNFTYRNFIEIIFENHEKSMQSYHLDGYSFFAVGIEPGTWTPEKRKGYNLLDAVSRHTVQVFPKCWAAIMLTFDNAGMWNLRSETAENRYLGQQLYISVVSPERSLRDEYSIPDSSLLCGLVKNLPKPAPYS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1901 552 Pfam Multicopper oxidase 160 300 IPR001117 -
Ssu9g1901 552 Pfam Multicopper oxidase 393 522 IPR011706 GO:0005507|GO:0016491
Ssu9g1901 552 Gene3D - 157 337 IPR008972 -
Ssu9g1901 552 CDD CuRO_2_AAO_like_1 159 299 IPR034271 -
Ssu9g1901 552 CDD CuRO_1_AAO_like_1 28 145 IPR034273 GO:0005507
Ssu9g1901 552 Gene3D - 347 545 IPR008972 -
Ssu9g1901 552 Gene3D - 28 148 IPR008972 -
Ssu9g1901 552 PANTHER L-ASCORBATE OXIDASE-LIKE PROTEIN 5 544 - -
Ssu9g1901 552 SUPERFAMILY Cupredoxins 23 173 IPR008972 -
Ssu9g1901 552 PANTHER MULTI-COPPER OXIDASE 5 544 IPR045087 -
Ssu9g1901 552 SUPERFAMILY Cupredoxins 156 338 IPR008972 -
Ssu9g1901 552 SUPERFAMILY Cupredoxins 349 539 IPR008972 -
Ssu9g1901 552 Pfam Multicopper oxidase 33 147 IPR011707 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1901 Ssu-Chr9 56536862 56538789 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1901 K00423 - gmx:100782413 1018.07