Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1886 ATGGCAATGGCAATGGCAATGGCAGCAAAGGTGGTTTGTTTGGTGATGGGGATGGTAAGCATAGTGGAAGGAGGGAGTTGGTGCGTGGCGAAGATTGACGCGAACGAGGAAGCACTGCAGAGAGCATTGGACTCTGCATGTGGAGGCGGTGGAGCTGATTGCGCTCCCATTCAGCCCGATGGCCTCTGCTTCATTCCTAACACTCTTCAAGCTCATGCTTCTTATGCCTTCAACAGCTTCTACCAGCGCAACGCAGGAGCTCCTGATGCATGCCTCTTCGCTGACACTTCCGCCATCGCCCAAACGGATCCCAGCTATGGATCTTGCGTGTACCCATCCTCTGCAAGTACCGCTGGAGttacaaatacaaatacaacAGTGACAACACCAGCGATGAACAACCCGAATGTGCCACCAACACGTACCTCAACAACTCCAATCCATGGCGGAGATGGTGCAGGAATGAACCCTCCAATCCCTGAAAATTCTAGAGCACCTTTAAAGACAATAACCGCCTCATTTTTAGTTTTCCTCTCGTCCATTCTCATTCTGTCCCTTATCCCTCAGACTTAG 573 0.5009 MAMAMAMAAKVVCLVMGMVSIVEGGSWCVAKIDANEEALQRALDSACGGGGADCAPIQPDGLCFIPNTLQAHASYAFNSFYQRNAGAPDACLFADTSAIAQTDPSYGSCVYPSSASTAGVTNTNTTVTTPAMNNPNVPPTRTSTTPIHGGDGAGMNPPIPENSRAPLKTITASFLVFLSSILILSLIPQT 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1886 190 Gene3D - 20 128 - -
Ssu9g1886 190 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN SUPERFAMILY PROTEIN 8 173 - -
Ssu9g1886 190 SMART X8_cls 26 111 IPR012946 -
Ssu9g1886 190 Pfam X8 domain 27 96 IPR012946 -
Ssu9g1886 190 PANTHER BETA-1,3 GLUCANASE 8 173 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1886 Ssu-Chr9 56387984 56391087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1886 23 113 Glycoside Hydrolase AT4G26830 49.451 5.43e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1886 - - gmx:100306413 204.527