Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1885 atgggttgggttatgttgtCTGTGTTGTTTTCACTAAGTTCAGTCATTGTTCATGGTGAAGTTCCAACCACTCTGGATGGACCCTTCAAGCCTGTGACCGTTCCTCTTGATCAGAGCTTCCGAGGAAACGCTGTGGACCTGCCAGATACAGATCCTCTGGTTCAAAGAATTGTTGAAGGGTTCCAGCCAGAAcaaatctctctctccctctctgcTTCTCATGATTCTGTTTGGATTTCTTGGATTACAGGGGAATTTCAAATTGGGGACAATATAGAGCCCTTAGATCCTGAAGGTGTTGGTAGCATAGTTCAATATGGTAGGTTCGGAAGGTCCATGAGTCACCAAGCTACGGGTTATTCCCTCGTCTACAGTCAACTTTATCCTTTTGAAGGCCTTCAGAACTACACCTCTGGAATTATACATCACGTTCGTCTCACAGGATTGAAACCCAACACACTATATCAATATCAATGTGGAGATCCTTCTTTGTCAGCAATGAGTGATGTTCATTATTTCAGGACTATGCCAGTTTCAGGCCCCAAGAGCTACCCTAGCAGAATAGCAGTGGTTGGAGACTTGGGTCTTACATACAATACCACATCCACTGTTAATCATATGACCAGTAACCATCCTGATCTTATTCTGTTGGTAGGAGATGTTAGTTACGCTAACCTGTATCTTACCAATGGTACTGGGGCAGACTGCTACTCTTGCTCATTTTCTAACACTCCCATCCATGAAACATATCAGCCTCGTTGGGATTATTGGGGAAGGTACATGCAGCCGCTGATTTCTAGTGTCCCAATAATGGTAATAGAAGGGAATCATGAGATAGAAGAACAAGCTGAAAACCAGACATTTGTTGCTTATAGTTCTCGATTTGCATTCCCATCAGAAGAGAGTGGATCATCATCCACTTTCTATTATTCTTTCAATGCTGGAGGGATACATTTTATAATGCTTGGGGCCTACATATCGTATGACAAATCAGGGGACCAGTACAAGTGGTTGGAGAGAGACCTGGCTTCTGTTGACAGGGAAGTAACTCCGTGGTTGGTGGCTACATGGCATCCACCATGGTACAGCACCTACAAGGCACATTATAGAGAAGCAGAGTGTATGAGGGTAGCAATGGAAGACTTACTATATAAATATGGCATTGACATTGTCTTCAATGGACATGTTCATGCGTATGAGAGATCAAACCGGGTATACAACTACACATTGGATCCTTGCGGTCCTGTTTATATCACGGTTGGTGATGGTGGTAACAGGGAAAAGATGGCAATCACACATGCTGATGAACCTGGAATCTGTCCAGAACCATCCACTACACCAGATGACTATATGGGTGGCTTCTGCGCCTTTAATTTTACATCCGGTCCAGCAGCAGGTAACTTCTGTTGGGACCGACAGCCTGATTATAGTGCTTTCAGAGAAAGTAGCTTCGGTCATGGCATTCTAGAGGTGAAAAATGAAACCCATGCACTGTGGATTTGGCATCGCAATCAAGACTTTTATGGTACCGCTGGAGATGAGATTTACATCGTTAGGCAACCTCAAAACTGCCTACCAGTCAAGCCAGAGGTACATAATCTTATGTATTGCCTATATTGTTGCATTATATTGACCGTTGTCCCATCGTTCTTATAG 1656 0.4251 MGWVMLSVLFSLSSVIVHGEVPTTLDGPFKPVTVPLDQSFRGNAVDLPDTDPLVQRIVEGFQPEQISLSLSASHDSVWISWITGEFQIGDNIEPLDPEGVGSIVQYGRFGRSMSHQATGYSLVYSQLYPFEGLQNYTSGIIHHVRLTGLKPNTLYQYQCGDPSLSAMSDVHYFRTMPVSGPKSYPSRIAVVGDLGLTYNTTSTVNHMTSNHPDLILLVGDVSYANLYLTNGTGADCYSCSFSNTPIHETYQPRWDYWGRYMQPLISSVPIMVIEGNHEIEEQAENQTFVAYSSRFAFPSEESGSSSTFYYSFNAGGIHFIMLGAYISYDKSGDQYKWLERDLASVDREVTPWLVATWHPPWYSTYKAHYREAECMRVAMEDLLYKYGIDIVFNGHVHAYERSNRVYNYTLDPCGPVYITVGDGGNREKMAITHADEPGICPEPSTTPDDYMGGFCAFNFTSGPAAGNFCWDRQPDYSAFRESSFGHGILEVKNETHALWIWHRNQDFYGTAGDEIYIVRQPQNCLPVKPEVHNLMYCLYCCIILTVVPSFL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1885 551 Pfam Iron/zinc purple acid phosphatase-like protein C 414 506 IPR025733 -
Ssu9g1885 551 CDD MPP_PAPs 182 519 IPR041792 -
Ssu9g1885 551 Gene3D - 182 445 IPR029052 -
Ssu9g1885 551 Gene3D - 454 526 IPR029052 -
Ssu9g1885 551 PANTHER ACID PHOSPHATASE RELATED 6 528 IPR039331 GO:0003993
Ssu9g1885 551 Gene3D - 62 178 - -
Ssu9g1885 551 Pfam Calcineurin-like phosphoesterase 187 399 IPR004843 GO:0016787
Ssu9g1885 551 PANTHER PURPLE ACID PHOSPHATASE 13 6 528 - -
Ssu9g1885 551 SUPERFAMILY Metallo-dependent phosphatases 187 508 IPR029052 -
Ssu9g1885 551 Pfam Purple acid Phosphatase, N-terminal domain 63 175 IPR015914 GO:0003993|GO:0046872
Ssu9g1885 551 SUPERFAMILY Purple acid phosphatase, N-terminal domain 41 177 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1885 Ssu-Chr9 56383440 56386678 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1885 63 424 Miscellaneous Gene Families AT1G13900 25.060 5.14e-22 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1885 K22390 - gmx:100784006 1058.51