Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1880 ATGGGGGAATCATCACATGACAATGTAATTGGGCTTGTATTGGCTCTCTCTTCCAGCGTGTTCATTGGTTCtagctttataattaaaaaattgggtCTTAAAAGAGCTGCCAACAACGGCAAAAGAGCAGCCACGGGAGGGCATTCGTATCTGTATGAACCGTGGTGGTGGGCTGGGATGATTTCAATGATCGGTGGGGAGATAGCCAATTTTGCAGCTTATGCATTCGCTCCTGCACTCCTTGTAACTCCCTTGGGAGCTTTAAGCATCATTTTTAGTGCAGTGCTAGCTCACTTCATATTGGAAGAGAAATTGCACATCTTTGGCGTGCTTGGGTGTGCTCTCTGTGTGGTGGGATCTATAACTATTGTTTTGCATGCACCTCATGAGAAAGTCATTCATTCTGTCAAGGAAGTGTGGCATCTTGCAACAGAACCAGgttttattatatacatatgcGCTGTTGTGATATTGGTTTCCGTCCTTATTTTCGGTTTTGCTCGAAGCCGTGGGCAGAGTCATATGATGGTATATATTGGAATATGTTCTCTCACCGGCTCCATTACGGTTATGGGTGTCAAAGCAGTGGGAATCGCTTTGAAGCTTACATTTGAAGGGAAGAATCAATTTGTTTACTTTCAGACCTGGTTCTTCACAGTGGTTGTCATAGGATGTTGCCTTTTGCAGATTAACTACTTGAACAAGGCTTTGGACGCCTTTAACACTGCTGTCGTGTCACCAGTTTATTACGTCATGTTTACATCGTTTACGATCTTCGCCAGCGTTATCATGTTTAAGGACTGGGACACGCAGAATGCAACGCAGATTGCGACCGAGTTGTGTGGCTTTGTCACAATTTTATCTGGGACCTTCCTCCTTCACAGAACTAAGGATATGGGAGATAAACCCTCGGAAGCCGCGGTTTATTCAAGTCCACACCTTCCTAATAATACTCAGACCCCTGAAAGAAtcgaaatttga 981 0.4261 MGESSHDNVIGLVLALSSSVFIGSSFIIKKLGLKRAANNGKRAATGGHSYLYEPWWWAGMISMIGGEIANFAAYAFAPALLVTPLGALSIIFSAVLAHFILEEKLHIFGVLGCALCVVGSITIVLHAPHEKVIHSVKEVWHLATEPGFIIYICAVVILVSVLIFGFARSRGQSHMMVYIGICSLTGSITVMGVKAVGIALKLTFEGKNQFVYFQTWFFTVVVIGCCLLQINYLNKALDAFNTAVVSPVYYVMFTSFTIFASVIMFKDWDTQNATQIATELCGFVTILSGTFLLHRTKDMGDKPSEAAVYSSPHLPNNTQTPERIEI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1880 326 PANTHER UNCHARACTERIZED 4 308 IPR008521 GO:0015095|GO:0015693|GO:0016021
Ssu9g1880 326 Pfam Magnesium transporter NIPA 7 299 IPR008521 GO:0015095|GO:0015693|GO:0016021
Ssu9g1880 326 MobiDBLite consensus disorder prediction 303 326 - -
Ssu9g1880 326 MobiDBLite consensus disorder prediction 310 326 - -
Ssu9g1880 326 PANTHER MAGNESIUM TRANSPORTER NIPA1-RELATED 4 308 - -
Ssu9g1880 326 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1880 Ssu-Chr9 56315795 56320490 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1880 K22733 - gmx:100785617 530.406