Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1873 ATGAAGAACGTGGAGGAGGGTGGTTTCAGGCGACTTGCATCATTCGTCTGCGATTGTGAGCCTTTCTCGGAGGAAGACCTCCAGGCCATCGAAGCCTCTCTTTCCAACCCCAACAGCAAACCCAAACGTCGTCGATTCAACGATCACACTCCCCGCCGCCGCTTGCCTACATCGCTCGTCGCTCTTCAACACCCAAATGCTTCTTCTCTCCCGCCTCATCCAGGCTATTCAAGAATGAGATTGCCTGTAATGAAGTTTAGTGGTCAAATTATGTATAGCAGGACTTTTGATGCTGTAGAGAAAGCTGCAACAAAGCTCTTACAAATtctggaagaaaaaaaaagagagatgatGCAAATTGCAATTGGATTTGACATCGAGTGGAAACCCACCTTCAGAAAAGGTGTTCCACCCGGAAAGGTAGCAGTGATGCAAATATGTGGTGAATCTAGTCATTGTCATGTTCTACACCTAATTCATTCTGGAATCCCTCGAAATTTACAGCTTTTGCTTGAAGATCCCACAGTCTTAAAGGTTGGAGCTGGGATTGATGGTGATGCTGGGAAGGTTTTTAAAGATTATAACATATCTGTTAAAGGTGTGATGGATCTTTCTTTTCATGCTAATCAAAAGCTTGGTGGAGATCATAAGTGGGGTCTTGCATCTTTGACTGAAAAACTTTTATCAAAACAGCTTAAAAAGCCCAATAAAATAAGACTGGGAAATTGGGAAACTCCTGTTTTGTCAAAGGAGCAACTAGAGTATGCAGCAACAGATGCTTTTGCTTCTTGGTATCTTTATCAGGCGATTAAAGATCTTCCCGGACGCCAAGGAAATCGCGGAAAGAAGTGGCGAAGTTGA 861 0.4251 MKNVEEGGFRRLASFVCDCEPFSEEDLQAIEASLSNPNSKPKRRRFNDHTPRRRLPTSLVALQHPNASSLPPHPGYSRMRLPVMKFSGQIMYSRTFDAVEKAATKLLQILEEKKREMMQIAIGFDIEWKPTFRKGVPPGKVAVMQICGESSHCHVLHLIHSGIPRNLQLLLEDPTVLKVGAGIDGDAGKVFKDYNISVKGVMDLSFHANQKLGGDHKWGLASLTEKLLSKQLKKPNKIRLGNWETPVLSKEQLEYAATDAFASWYLYQAIKDLPGRQGNRGKKWRS 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1873 286 SMART 35exoneu6 97 275 IPR002562 GO:0003676|GO:0006139|GO:0008408
Ssu9g1873 286 Gene3D - 75 274 IPR036397 GO:0003676
Ssu9g1873 286 PANTHER 3-5 EXONUCLEASE 53 276 - -
Ssu9g1873 286 Coils Coil 96 116 - -
Ssu9g1873 286 SUPERFAMILY Ribonuclease H-like 121 271 IPR012337 -
Ssu9g1873 286 MobiDBLite consensus disorder prediction 31 53 - -
Ssu9g1873 286 CDD WRN_exo 112 271 - -
Ssu9g1873 286 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATED 53 276 - -
Ssu9g1873 286 Pfam 3'-5' exonuclease 104 271 IPR002562 GO:0003676|GO:0006139|GO:0008408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1873 K22807 - gmx:100801291 468.774