Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1870 ATGTCATTGTTGGTGGAGAAAACAACGAGTGGGAGGGAGTACAAGGTGAAGGACATGACTCAGGCTGATTTCGGTCGCATGGAGATCGAGCTTGCGGAGGTGGAAATGCCGGGCCTGATGGCGTGCCGCGCCGAGTTCGGACCCTCCAAACCCTTCAAGGGCGCCAAGATCACCGGCTCCCTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCACCGCCCTCGGCGCTGAGGTCCGCTGGTGCTCCTGCAACATCTTCTCCACGCAGGACCACGCCGCGGCCGCCATCGCCCGCGACAGCGCCTCCGTCTTCGCCTGGAAGGGCGAGACCCTCCAGGAGTACTGGTGGTGCACCGAGCGCGCCCTAGACTGGGGCCCCGGCGGCGGACCCGACCTCATCGTCGACGACGGCGGCGACACCACCCTCCTCATCCACGAGGGCGTCAAGGCCGAGCAGGTCTACGAGAAGACGGGACAGTGTCCCGACCCCGCTTCCTCCGACAACGCCGAGTTCCAGATCGTGCTCACCATCATCAGGGATGGCTTGAAGACCGATCCCAAGAGGTACCACAAGATGAAGGACAGACTCGTCGGTGTCTCCGAAGAAACCACCACCGGTGTCAAGAGGCTCTACCAGATGCAGGCCAATGGCTCCCTCTTGTTCCCTGCCATCAATGTCAACGACTCTGTTACCAAGAGCAAGTTTGACAACTTGTATGGATGCCGTCACTCGCTCCCCGATGGATTGATGAGAGCCACTGATGTGATGATTGCCGGAAAGGTTGCCGTTGTGTGTGGCTATGGAGATGTTGGCAAGGGTTGTGCTGCTGCCATGAAGCAGGCTGGGGCTCGTGTCATTGTCACCGAGATTGATCCCATTTGTGCCCTTCAGGCTCTCATGGAGGGTCTTCAGGTTCTGACCCTGGAGGATACTCTCCCTGTGGCCGACATCTTCGTTACCACCACCGGGAACAAGGACATTATCATGGTGGACCacatgaagaaaatgaagaacaatGCCATTGTGTGCAACATTGGCCACTTTGACAACGAAATCGACATGCTGGGGCTTGAGACCTGCCCAGGTGTGAAGCGCATCACCATTAAGCCTCAAACCGACAGATGGGTTTTCCCTGAGACCAACTCAGGCATCATTGTCCTGGCTGAGGGGCGTTTGATGAACTTGGGGTGTGCCACGGGGCACCCCAGCTTTGTGATGTCGTGCTCCTTCACCAACCAGGTCATCGCTCAGCTTGAGCTGTGGAAGGAGAAGGGTTCTGGCAAGTATGAGAAGAAGGTTTATGTTTTGCCCAAGCACCTTGATGAGAAAGTGGCTGCTCTCCACCTTGGCAAGCTTGGAGCTAAGCTCACCAAGCTTACCAAAGACCAGGCAGATTATATCAGTGTGCCCGTTGAGGGTCCATACAAGCCTGCTCATTACAGGTACTGA 1458 0.5658 MSLLVEKTTSGREYKVKDMTQADFGRMEIELAEVEMPGLMACRAEFGPSKPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSASVFAWKGETLQEYWWCTERALDWGPGGGPDLIVDDGGDTTLLIHEGVKAEQVYEKTGQCPDPASSDNAEFQIVLTIIRDGLKTDPKRYHKMKDRLVGVSEETTTGVKRLYQMQANGSLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAAMKQAGARVIVTEIDPICALQALMEGLQVLTLEDTLPVADIFVTTTGNKDIIMVDHMKKMKNNAIVCNIGHFDNEIDMLGLETCPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKGSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKDQADYISVPVEGPYKPAHYRY 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1870 485 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 13 242 - -
Ssu9g1870 485 PIRSF SAHH 2 485 IPR000043 -
Ssu9g1870 485 SMART AdoHcyase_NAD_2 240 403 IPR015878 -
Ssu9g1870 485 PANTHER ADENOSYLHOMOCYSTEINASE 1 485 IPR000043 -
Ssu9g1870 485 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 361 485 - -
Ssu9g1870 485 Gene3D - 15 485 IPR042172 -
Ssu9g1870 485 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 2. 262 279 IPR020082 -
Ssu9g1870 485 Gene3D - 243 404 - -
Ssu9g1870 485 Pfam S-adenosyl-L-homocysteine hydrolase 13 484 IPR000043 -
Ssu9g1870 485 CDD SAHH 23 473 IPR000043 -
Ssu9g1870 485 TIGRFAM ahcY: adenosylhomocysteinase 14 477 IPR000043 -
Ssu9g1870 485 SMART AdoHcyase_2 13 484 IPR000043 -
Ssu9g1870 485 Pfam S-adenosyl-L-homocysteine hydrolase, NAD binding domain 240 403 IPR015878 -
Ssu9g1870 485 Hamap S-inosyl-L-homocysteine hydrolase [ahcY]. 9 477 IPR000043 -
Ssu9g1870 485 ProSitePatterns S-adenosyl-L-homocysteine hydrolase signature 1. 85 99 IPR020082 -
Ssu9g1870 485 PANTHER ADENOSYLHOMOCYSTEINASE 1 485 - -
Ssu9g1870 485 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 240 403 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1870 Ssu-Chr9 56162366 56164411 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1870 K01251 - gmx:100787210 922.539