Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1861 ATGTCCGCAGTTCCTATCAATTCCAGCTATGCTTCCACCTTCTCTTATTCTGCGCACACGcttcctttcttctttgctCGCAACAACTTCACCAGGATCAATCTTCGTCGACCTGTGTTTTGCCAATTTGAATCCCTGACAGAGAAAACGCTGACAAGAAGGTGCTCCCCCATTCTAGAAAGTTCATTACTCTCTGGTAATGGTGGTGCTGTGGCCTCAGACGAGTGGAAAGCTGTTCCTGATATTTGGCGATCTTCTGCCGAGAAGTATGGTGATAAAGTAGCATTAATAGATCCGTATCATGATCCTCCTTCGACTATGACATATAAAcagTTGGAGGATGCAATATTGGACTTTGCTGAAGGGTTGAGAGTTATTGGAGTAAGACCCAATGAGAAGCTTGCGTTTTTTGCTGATAATTCATGTCGCTGGCTTGTAGCAGATCAGGGTATGATGGCATGTGGGGCAATCAATGTGGTAAGGGGTTCGAGGTCATCAATTGAAGAACTGCTGCAAATATACAACCACTCTGAAAGTGTTGCACTAGCTGTGGACAATCCTGAAATGTTTAATCGGATAGCAAAACTGTTTTATTTGAAGGCTTCTATGAGATTTATTATTCTGCTTTGGGGAGAAAAATCATGCCTGGTCAGTGGAGGAGACAAGGAGGTGCCTGTCTTTACTTTCATGGAAGTCATACATTTGGGACAAGAGAGTCGCAGAGTATTGTTTGATTCTCTTGATAATAGGAGGCACTATATGTATGAAGCAATTAAATCTGATGACATTGCTACTCTTGTATACACAAGTGGAACTACTGGAAATCCAAAGGGTGTTATGCTAACCCACCAGAATCTTTTGCATCAGATAAAAAACTTACGGGATATTGTACCTGCTGAAGTTGGGGATAGATTTCTAAGCATGCTGCCTTCCTGGCATGCATATGAAAGAGCTtgtgagtatttcattttctcgtGTGGTGTTGAACAAGTATACACAACTGTGAGAAACTTGAAGGATGATTTGGGACGTTATCAACCACATTACTTGATTTCTGTTCCTTTAGTTTATGAAACTTTATACAGTGGGATCCAGAAGCAGATATCTACAAGCTCCCTTGTTAGAAAGCTTGTCGCACTCACATTCATAAGGGTCAGCTTAAGGTACATGGAGTGTAAGCGGATTTATGAGGGTAAATGTCTAACAAAGGATCAGAAGCCACCTTCCTATCTCCATTCAATGTTGGATTGGTTATGGGCAAGAGTTATTGCCACAATATTATTTCCAGTTCATTTGCTGGCGAAGAAATTGGTCTACAGTAAAATTCATTCAGCTATTGGAATGTCAAAGGCTGGAATAAGTGGTGGTGGTAGCTTATCTTCTCATGTCGATAAATTTTTTGAGGCTATTGGTGTGACTGTGCAGAATGGATATGGTTTAACAGAAACTTCACCAGTTATTGCTGCACGACGGCTTAGCTGTAATGTTATTGGGTCTGTTGGGCATCCAATTAAGCATACAGAATTCAAAGTCGTAGATTCTGAGACTGATGAATTTCTTCCACCTGGTTCAAAGGGAATTTTGAAAGTCAGGGGCCCACAATTGATGAAGGGATACTACAAGAATCCTTCAGCTACAAATCAGGTCATAGATAGGGATGGCTGGCTAAATACTGGGGATATTGGTTGGATTGTTCCCCACCATTCAATTGGGCGGAGTTGTAATTCCAGCGGAGTAATTGTCGTGGAAGGCCGTGCTAAAGACACTATTGTGCTATCTACAGGTGAAAATGTTGAACCGGGAGAACTTGAAGAAGCTGCCATGAGGAGTGGCCTCATACATCAAATTGTTGTTATTGGCCAGGATAAGCGACGTCTAGGGGCTGTAATTGTTCCTAACAAAGAAGAAGTCTTAAAGGCAGCAAGGGAATCGTCAGTTATAGATTCCAACAGTTCAGATGTCAGTCAGGAAAAAGTGACCAGtctaatatataaagaattaaagacATGGACATCAGAGTCTCCATTTCAAATTGGGCCAATCCTTCTCGTAAATGATCCCTTCACGATTGATAATGGGCTGATGACACCCACCATGAAAATTCGAAGGGATAAAGTTGTGGCTCAATACAAGGACCAAATAGAGAATCTATACAAATAA 2160 0.4051 MSAVPINSSYASTFSYSAHTLPFFFARNNFTRINLRRPVFCQFESLTEKTLTRRCSPILESSLLSGNGGAVASDEWKAVPDIWRSSAEKYGDKVALIDPYHDPPSTMTYKQLEDAILDFAEGLRVIGVRPNEKLAFFADNSCRWLVADQGMMACGAINVVRGSRSSIEELLQIYNHSESVALAVDNPEMFNRIAKLFYLKASMRFIILLWGEKSCLVSGGDKEVPVFTFMEVIHLGQESRRVLFDSLDNRRHYMYEAIKSDDIATLVYTSGTTGNPKGVMLTHQNLLHQIKNLRDIVPAEVGDRFLSMLPSWHAYERACEYFIFSCGVEQVYTTVRNLKDDLGRYQPHYLISVPLVYETLYSGIQKQISTSSLVRKLVALTFIRVSLRYMECKRIYEGKCLTKDQKPPSYLHSMLDWLWARVIATILFPVHLLAKKLVYSKIHSAIGMSKAGISGGGSLSSHVDKFFEAIGVTVQNGYGLTETSPVIAARRLSCNVIGSVGHPIKHTEFKVVDSETDEFLPPGSKGILKVRGPQLMKGYYKNPSATNQVIDRDGWLNTGDIGWIVPHHSIGRSCNSSGVIVVEGRAKDTIVLSTGENVEPGELEEAAMRSGLIHQIVVIGQDKRRLGAVIVPNKEEVLKAARESSVIDSNSSDVSQEKVTSLIYKELKTWTSESPFQIGPILLVNDPFTIDNGLMTPTMKIRRDKVVAQYKDQIENLYK 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1861 719 PANTHER LONG-CHAIN-FATTY-ACID COA LIGASE (AMP-FORMING) 2 719 - -
Ssu9g1861 719 Gene3D - 74 392 IPR042099 -
Ssu9g1861 719 Pfam AMP-binding enzyme 85 592 IPR000873 -
Ssu9g1861 719 Gene3D - 450 493 - -
Ssu9g1861 719 Gene3D - 587 717 IPR045851 -
Ssu9g1861 719 PANTHER ACYL-ACTIVATING ENZYME 16, CHLOROPLASTIC-RELATED 2 719 - -
Ssu9g1861 719 ProSitePatterns Putative AMP-binding domain signature. 266 277 IPR020845 -
Ssu9g1861 719 SUPERFAMILY Acetyl-CoA synthetase-like 75 718 - -
Ssu9g1861 719 Gene3D Luciferase; Domain 3 494 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1861 Ssu-Chr9 56038346 56051138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1861 7 719 Acyl Lipid Metabolism Gene Families AT3G23790 68.487 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1861 K01897 - gmx:100782583 1337.78