Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1855 ATGTCACTGCTTTGGCTACCAGACATAAATCATAATCCCTGTCCCCTGGTGTTAGTAAGTGCGATTCCACGCGCCACCGCAACCATGGTGCAGCACCGCTTCCTCCTCATAACATACCCCATTCAAGGCCACATAAATCCCGCCATCCAGTTCGCTAAGCGTCTCGCTGGCATGGGCGTCCACGTCACTTTCGCCACCAGTGTCTACCTCCACCGTCGCATGCTCAACAAACTAACCGTCCCCGGCCTCTCCTTCGCCATCTTCTCCGACGGCTACGACGACGGTTACAAGGCCACCGCCGACTCCGCCGTGGTGTCGTACATGTCGGAGCTCAAGCTCCGCGGTTCTGAGTCTCTCAGAAACATCATAACCGCCGCGAAACAGGATGGCCAACCTTTCACCTGCGTAGCCTACACCATCCTCCTTCCCTGGGCCGCACAGGTGGCGCGTGAGTTTCACCTCCCGGGGGCGCTGCTGTGGATTCAACCAGCCACGGTTTTTGATATCTACTACTACTACTTCCACGAGTACAGGGACTACATCAGCCACAAATCAGAGGACCGCACCATACAATTGCCCGGTTTGCCATTTTCACTCACAACACGTGACATTCCCTCCTTCCTCTTACCCTCCAATATCTATACCTTTGCTCTTCCATCCCTCGAAGAACAGTTTCAAGAGCTTGACAAAGAAACCAACCCAAGAGTTCTTCTGAACACCTTTGAGGAGTTGGAACCGGAGGCCCTGAGAGCAATTGGTAAGTTCACGATGATACCAATTGGGCCATTGATTCCCTCTGCCTTCCTGGACGGTAAAGACCCGGGTGACACTTCCTTTGGTGGTGACATCTTTGATGGCTCGAACGATTACGTTGAATGGTTGGACTCAAAGCCTGAGTTGTCTGTGGTTTATGTGTCATTTGGCACACTTGCTGTGTTGGCTAGGAGACAGATGGAGGAGGTTGCACGTGCCTTGTTGGATTCTGGATATCCCTTTTTGTGGGTCCTTAGAGAAAATTATGAGAAGCAAGGAAAGGAACAAGAGCTGAGCTGCAGAGAGGAACTTGAGCAGAGGGGGAAGATTGTGAAATGGTGTTCCCAGGTGGAGGTTCTGTCGCATCGCTCCTTGGGTTGTTTCGTGACACACTGTGGATGGAATTCGACCGTGGAAAGTTTGGCTTCGGGGGTTCCTATGGTGGCATTTCCTCAGTGGTCGGACCAAGGGACTAATGCGAAGCTAGTGCATGATGTGTGGAAGACGGGGGTGAGAGTGGATGATAAGGTGAATGAGGAGGGGATAGTGGAAGCTGAGGAGATTAGGAAGTGTTTGGAAGTGGTCATGGGGAGCGGAGGAGAAGGACAAGAATTGAGAAGGAGTGCTAAGAAATGGAAATGCTTGGCCAGGGATGCCGTGAAGGAAGGAGGCTCTTCGGATAGGAATATGAGGACTTTTCTCGATGATGTTGCAAGACAAGGACAGGATTCTTTGTTGGGTagttga 1500 0.516 MSLLWLPDINHNPCPLVLVSAIPRATATMVQHRFLLITYPIQGHINPAIQFAKRLAGMGVHVTFATSVYLHRRMLNKLTVPGLSFAIFSDGYDDGYKATADSAVVSYMSELKLRGSESLRNIITAAKQDGQPFTCVAYTILLPWAAQVAREFHLPGALLWIQPATVFDIYYYYFHEYRDYISHKSEDRTIQLPGLPFSLTTRDIPSFLLPSNIYTFALPSLEEQFQELDKETNPRVLLNTFEELEPEALRAIGKFTMIPIGPLIPSAFLDGKDPGDTSFGGDIFDGSNDYVEWLDSKPELSVVYVSFGTLAVLARRQMEEVARALLDSGYPFLWVLRENYEKQGKEQELSCREELEQRGKIVKWCSQVEVLSHRSLGCFVTHCGWNSTVESLASGVPMVAFPQWSDQGTNAKLVHDVWKTGVRVDDKVNEEGIVEAEEIRKCLEVVMGSGGEGQELRRSAKKWKCLARDAVKEGGSSDRNMRTFLDDVARQGQDSLLGS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1855 499 ProSitePatterns UDP-glycosyltransferases signature. 364 407 IPR035595 -
Ssu9g1855 499 Gene3D Glycogen Phosphorylase B; 278 469 - -
Ssu9g1855 499 PANTHER GLYCOSYLTRANSFERASE 31 489 - -
Ssu9g1855 499 Gene3D Glycogen Phosphorylase B; 37 481 - -
Ssu9g1855 499 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 31 489 - -
Ssu9g1855 499 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 33 492 - -
Ssu9g1855 499 CDD GT1_Gtf-like 33 480 IPR002213 GO:0008194
Ssu9g1855 499 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 289 422 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1855 Ssu-Chr9 55929150 55930649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1855 34 487 Glycosyltransferase AT4G15550 50.000 2.44e-163 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1855 - - pvu:PHAVU_001G265400g 793.497