Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1847 ATGGCTGCGACTTTGACGATCCTGGTCACCTTGCTCTCGGTCCTTTCTTCAGCATCGTGTGCGCGAATGGTTGGGGGGAAGACGGAGATTCCTGACGTGAGAACAAACAGGGAAGTGCAAGAGCTTGGGAGGTTCGCGGTGGAGGAGTATAACCGCGGTTTGAAGCCGTGGGAGAACAACAACGTTAACGACAATGGGAGAGAGGAGTTGAAGTTCGCAGAGGTGGTGGAGGCACAGCAACAAGTGGTGTCGGGGATGAAGTACTATTTGAAGATCTCGGCTACTCATGATGGGGTTCACAAAATGTTCTCCTCTGTGGTGGTGGTGAAGCCATGGCTTCATTCCAAGCAGCTCCTCCATTTTGCGCCTGCATCATCCAGCACCGTCCAGTAA 393 0.5293 MAATLTILVTLLSVLSSASCARMVGGKTEIPDVRTNREVQELGRFAVEEYNRGLKPWENNNVNDNGREELKFAEVVEAQQQVVSGMKYYLKISATHDGVHKMFSSVVVVKPWLHSKQLLHFAPASSSTVQ 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1847 130 ProSitePatterns Cysteine proteases inhibitors signature. 80 93 IPR018073 -
Ssu9g1847 130 PANTHER CYSTEINE PROTEINASE INHIBITOR 2 4 126 - -
Ssu9g1847 130 PANTHER CYSTEINE PROTEINASE INHIBITOR 2 4 126 - -
Ssu9g1847 130 SUPERFAMILY Cystatin/monellin 30 125 IPR046350 -
Ssu9g1847 130 SMART CY_4 22 124 IPR000010 GO:0004869
Ssu9g1847 130 Pfam Aspartic acid proteinase inhibitor 35 122 IPR000010 GO:0004869
Ssu9g1847 130 CDD CY 25 121 IPR000010 GO:0004869
Ssu9g1847 130 Gene3D - 20 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1847 Ssu-Chr9 55829761 55830153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1847 - K13899 gmx:100775792 198.749